Pre_GI: BLASTP Hits

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Query: NC_016830:2247789:2275176 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 2275176, End: 2275856, Length: 681

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:4630367:463459846345984634924327Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein1e-44179
NC_014718:440960:4409604409604424201461Burkholderia rhizoxinica HKI 454 chromosome, complete genomeEndopeptidase degP8e-1373.9
NC_007298:2170181:2176721217672121781421422Dechloromonas aromatica RCB, complete genomePeptidase S1C, Do2e-0756.2
NC_007626:1038214:1063664106366410654151752Magnetospirillum magneticum AMB-1, complete genomeTrypsin-like serine protease3e-0755.5
NC_007626:418067:4409444409444427011758Magnetospirillum magneticum AMB-1, complete genomehypothetical protein1e-0653.5
NC_002939:360462:3615063615063629001395Geobacter sulfurreducens PCA, complete genometrypsin domain/PDZ domain protein2e-0652.8
NC_011901:3072817:3094458309445830958401383Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2-alkenal reductase7e-0650.8
NC_015675:4442000:4442113444211344435071395Mesorhizobium opportunistum WSM2075 chromosome, complete genomeprotease Do8e-0650.4