Pre_GI: BLASTP Hits

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Query: NC_016830:2247789:2274042 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 2274042, End: 2275082, Length: 1041

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:4630367:463496346349634635463501Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein2e-87323
NC_015379:4630367:463555646355564636005450Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein6e-53207
NC_008781:2655071:268016426801642680613450Polaromonas naphthalenivorans CJ2, complete genometransmembrane pair domain protein1e-0861.2
NC_014532:3479674:350238435023843502803420Halomonas elongata DSM 2581, complete genometransmembrane pair domain protein1e-0860.8
NC_009092:1305355:132450913245091324931423Shewanella loihica PV-4, complete genometransmembrane pair domain protein8e-0858.2
NC_010084:988908:101020810102081010654447Burkholderia multivorans ATCC 17616 chromosome 1, completetransmembrane pair domain-containing protein1e-0758.2
NC_016043:1603499:161313816131381613620483Taylorella asinigenitalis MCE3 chromosome, complete genomehypothetical protein1e-0654.3