Pre_GI: BLASTP Hits

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Query: NC_016830:1901488:1921710 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1921710, End: 1923356, Length: 1647

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:2017607:2036366203636620380181653Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative heparinase0727
NC_013194:3724500:3732035373203537336991665Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeHeparinase II/III family protein8e-154544
NC_009654:894492:8928528928528944951644Marinomonas sp. MWYL1, complete genomeheparinase II/III family protein5e-130465
NC_011768:1718869:1761609176160917632761668Desulfatibacillum alkenivorans AK-01, complete genomeHeparinase II/III family protein1e-116420
NC_009783:670449:6892796892796909041626Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein1e-110400
NC_007517:1676604:1698392169839217000771686Geobacter metallireducens GS-15, complete genomeHeparinase II/III-like6e-84311
NC_014355:2321957:2340578234057823423861809Candidatus Nitrospira defluvii, complete genomehypothetical protein9e-81301
NC_009615:1849237:1850504185050418520901587Parabacteroides distasonis ATCC 8503 chromosome, complete genomeprenyltransferase and squalene oxidase2e-51204
NC_009921:2565640:2587512258751225892751764Frankia sp. EAN1pec, complete genomeHeparinase II/III family protein1e-50201
NC_010162:10208521:1021470110214701102162571557Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-48194
NC_015738:760309:7670047670047686471644Eggerthella sp. YY7918, complete genomehypothetical protein1e-34148
NC_013202:59278:7920279202810131812Halomicrobium mukohataei DSM 12286, complete genomeHeparinase II/III family protein4e-34146
NC_008726:1776192:1790946179094617927301785Mycobacterium vanbaalenii PYR-1, complete genomeHeparinase II/III family protein9e-32138
NC_008819:785447:7939507939507957521803Prochlorococcus marinus str. NATL1A, complete genomehypothetical protein2e-31137
NC_015388:2434922:2450541245054124525562016Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeHeparinase II/III family protein3e-27124
NC_018645:4277393:4281781428178142837601980Desulfobacula toluolica Tol2, complete genomehypothetical protein2e-1687.8
NC_008009:4479648:4479648447964844815311884Acidobacteria bacterium Ellin345, complete genomeHeparinase II/III-like7e-1582.4
NC_007759:2608173:2623613262361326256132001Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein7e-1375.9
NC_013194:963735:9865139865139885282016Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeHeparinase II/III family protein2e-1274.7
NC_014550:1581812:1591807159180715935281722Arthrobacter arilaitensis Re117, complete genomehypothetical protein3e-0963.9
NC_004663:6104875:6104875610487561069832109Bacteroides thetaiotaomicron VPI-5482, complete genomeheparinase III protein, heparitin sulfate lyase4e-0963.5
NC_004463:6924150:6935029693502969369691941Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-0757.8
NC_013355:1332263:1347614134761413493801767Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeHeparinase II/III family protein1e-0655.1
NC_009445:7324977:7351428735142873534041977Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein5e-0653.1
NC_011884:3881568:3896195389619538984952301Cyanothece sp. PCC 7425, complete genomeHeparinase II/III family protein5e-0653.1
NC_009659:2523874:2537280253728025395382259Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein5e-0653.1