Pre_GI: BLASTP Hits

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Query: NC_016830:1901488:1913982 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1913982, End: 1915241, Length: 1260

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:2017607:2030647203064720319091263Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative polysaccharide biosynthesis protein8e-98357
NC_013361:2848949:2861987286198728632491263Escherichia coli O26:H11 str. 11368 chromosome, complete genomeO-antigen flippase Wzx2e-32140
NC_015185:1352171:1353568135356813548481281Desulfurobacterium thermolithotrophum DSM 11699 chromosome,polysaccharide biosynthesis protein3e-1169.7
NC_014119:977136:9835949835949848591266Burkholderia sp. CCGE1002 chromosome chromosome 3, completepolysaccharide biosynthesis protein1e-0964.7
NC_017272:607900:6201606201606214491290Thermus thermophilus SG0.5JP17-16 chromosome, complete genomepolysaccharide biosynthesis protein2e-0860.8
NC_011026:2450325:2463753246375324650031251Chloroherpeton thalassium ATCC 35110, complete genomepolysaccharide biosynthesis protein2e-0860.5
NC_010681:934374:9486099486099498681260Burkholderia phytofirmans PsJN chromosome 1, complete sequencepolysaccharide biosynthesis protein2e-0860.5
NC_013894:117644:1321121321121333981287Thermocrinis albus DSM 14484 chromosome, complete genomepolysaccharide biosynthesis protein4e-0756.2
NC_006510:3321426:3363539336353933647981260Geobacillus kaustophilus HTA426, complete genomeO-antigen transporter4e-0756.2
NC_012759:1983975:1998844199884420000911248Escherichia coli BW2952 chromosome, complete genomeputative polisoprenol-linked O-antigen transporter5e-0755.8
NC_010473:2183567:2197369219736921986161248Escherichia coli str. K-12 substr. DH10B, complete genomepredicted polisoprenol-linked O-antigen transporter5e-0755.8
NC_000913:2092559:2106361210636121076081248Escherichia coli K12, complete genomepredicted polisoprenol-linked O-antigen transporter5e-0755.8
AC_000091:2096672:2110474211047421117211248Escherichia coli W3110 DNA, complete genomepredicted polisoprenol-linked O-antigen transporter5e-0755.8
NC_007511:2072838:2072838207283820740941257Burkholderia sp. 383 chromosome 2, complete sequencePolysaccharide biosynthesis protein8e-0652