Pre_GI: BLASTP Hits

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Query: NC_016830:1645879:1665890 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1665890, End: 1666255, Length: 366

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014323:292958:306446306446306805360Herbaspirillum seropedicae SmR1 chromosome, complete genome5-carboxymethyl-2-hydroxymuconate delta-isomerase1e-1684.7
NC_016613:1960811:196426819642681964603336Vibrio sp. EJY3 chromosome 1, complete sequence5-carboxymethyl-2-hydroxymuconate isomerase2e-0857.8
NC_014722:193500:213823213823214212390Burkholderia rhizoxinica HKI 454, complete genome5-carboxymethyl-2-hydroxymuconate delta-isomerase5e-0753.1
NC_009783:670449:702536702536702883348Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein1e-0652
NC_004603:230000:254613254613254960348Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative 5-carboxymethyl-2-hydroxymuconate delta isomerase1e-0652