Pre_GI: BLASTP Hits

Some Help

Query: NC_016830:1645879:1647490 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1647490, End: 1648050, Length: 561

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:1579204:162053216205321621092561Pseudomonas fluorescens SBW25 chromosome, complete genomeputative regulatory protein8e-100362
NC_007005:1738500:174045517404551741018564Pseudomonas syringae pv. syringae B728a, complete genomeglycine cleavage system transcriptional repressor9e-98355
NC_017986:4091051:409153640915364092096561Pseudomonas putida ND6 chromosome, complete genomeglycine cleavage system transcriptional repressor1e-88325
NC_010501:4379920:439795643979564398516561Pseudomonas putida W619, complete genomeglycine cleavage system transcriptional repressor2e-88324
NC_018080:4436646:445550744555074456064558Pseudomonas aeruginosa DK2 chromosome, complete genomeglycine cleavage system transcriptional repressor1e-81301
NC_018012:1274500:128677712867771287316540Thiocystis violascens DSM 198 chromosome, complete genomeglycine cleavage system regulatory protein2e-29128
NC_013889:413909:433267433267433821555Thioalkalivibrio sp. K90mix chromosome, complete genomeamino acid-binding ACT domain protein5e-1890.5
NC_016613:2596464:259881325988132599355543Vibrio sp. EJY3 chromosome 1, complete sequenceglycine cleavage system transcriptional repressor5e-1167.4
NC_014541:1414627:143521814352181435757540Ferrimonas balearica DSM 9799 chromosome, complete genomeglycine cleavage system transcriptional repressor, putative1e-0652.8