Pre_GI: BLASTP Hits

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Query: NC_016830:1645879:1645879 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1645879, End: 1646949, Length: 1071

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:1579204:1618813161881316198831071Pseudomonas fluorescens SBW25 chromosome, complete genomeputative permease5e-132471
NC_007005:1738500:1738835173883517399051071Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein7e-118423
NC_010501:4379920:4399116439911644001861071Pseudomonas putida W619, complete genomeprotein of unknown function UPF01182e-106385
NC_018080:4436646:4456609445660944576821074Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein4e-92338
NC_002516:1031386:1090891109089110919641074Pseudomonas aeruginosa PAO1, complete genomehypothetical protein4e-92338
NC_018868:1271742:1292801129280112938711071Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomemembrane protein, PerM family2e-55216
NC_014541:1414627:1414627141462714156941068Ferrimonas balearica DSM 9799 chromosome, complete genomeprotein of unknown function UPF01182e-54213
NC_019940:2893535:2910218291021829112911074Thioflavicoccus mobilis 8321 chromosome, complete genomepermease1e-53210
NC_016613:2628843:2640870264087026419431074Vibrio sp. EJY3 chromosome 1, complete sequencepermease PerM3e-50199
NC_010519:1684901:1686281168628116873331053Haemophilus somnus 2336 chromosome, complete genomehypothetical protein2e-46186
NC_013173:1671288:1686134168613416871981065Desulfomicrobium baculatum DSM 4028, complete genomeprotein of unknown function UPF01182e-42173
NC_010939:896500:9148039148039158641062Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative permease perM-like protein4e-41168
NC_020418:2718500:2719892271989227209741083Morganella morganii subsp. morganii KT, complete genomePutative permease PerM4e-39162
NC_009719:3532587:3565121356512135662181098Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein1e-0964.7