Pre_GI: BLASTP Hits

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Query: NC_016822:1431200:1437211 Shigella sonnei 53G, complete genome

Start: 1437211, End: 1439145, Length: 1935

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:2514544:2527791252779125297251935Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative serine protein kinase01311
NC_015566:2957956:2962383296238329643171935Serratia sp. AS12 chromosome, complete genomeputative serine protein kinase, PrkA01281
NC_017047:2260118:2282969228296922849031935Rahnella aquatilis HX2 chromosome, complete genomePrkA family serine protein kinase01280
NC_012691:1144715:1144715114471511466401926Tolumonas auensis DSM 9187, complete genomeputative serine protein kinase, PrkA01153
NC_015497:3497680:3497680349768034996021923Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeserine protein kinase, PrkA01104
NC_008702:2259430:2275699227569922776211923Azoarcus sp. BH72, complete genomePrkA protein01065
NC_016002:3077648:3089853308985330917811929Pseudogulbenkiania sp. NH8B, complete genomeputative serine protein kinase, PrkA01047
NC_012559:1064821:1073671107367110755991929Laribacter hongkongensis HLHK9, complete genomePrkA01042
NC_014722:1467996:1486833148683314887551923Burkholderia rhizoxinica HKI 454, complete genomeserine protein kinase01020
NC_009434:796878:8250168250168268091794Pseudomonas stutzeri A1501, complete genomeserine protein kinase PrkA01001
NC_016622:282631:2867492867492886951947Azospirillum lipoferum 4B, complete genomeputative serine protein kinase0941
NC_008789:1837493:1848127184812718500731947Halorhodospira halophila SL1, complete genomeputative serine protein kinase, PrkA0919
NC_014393:139690:1396901396901416121923Clostridium cellulovorans 743B chromosome, complete genomeputative serine protein kinase, PrkA4e-90332
NC_007503:1047577:1065661106566110675561896Carboxydothermus hydrogenoformans Z-2901, complete genomeprkA protein8e-71268
NC_013385:1064188:1083924108392410858041881Ammonifex degensii KC4, complete genomeputative serine protein kinase, PrkA9e-70265
NC_010337:147664:1821031821031839981896Heliobacterium modesticaldum Ice1, complete genomeserine protein kinase, putative4e-69263
NC_014829:1526401:1540202154020215420971896Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeputative serine protein kinase, PrkA4e-68259
NC_013205:526281:5300635300635319611899Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,putative serine protein kinase, PrkA5e-65249
NC_014152:2056991:2059605205960520615001896Thermincola sp. JR, complete genomeputative serine protein kinase, PrkA1e-62241
NC_017030:7967192:7975990797599079780532064Corallococcus coralloides DSM 2259 chromosome, complete genomePrkA protein4e-52206
NC_007760:1415663:1426069142606914281412073Anaeromyxobacter dehalogenans 2CP-C, complete genomeputative serine protein kinase, PrkA4e-50199
NC_011891:3004000:3007575300757530096472073Anaeromyxobacter dehalogenans 2CP-1, complete genomeputative serine protein kinase, PrkA1e-49198
NC_015711:4033975:4043121404312140451842064Myxococcus fulvus HW-1 chromosome, complete genomeputative serine protein kinase, PrkA2e-49197
NC_020126:8287556:8297136829713682991992064Myxococcus stipitatus DSM 14675, complete genomePrkA protein5e-49196
NC_008095:7211395:7221520722152072235832064Myxococcus xanthus DK 1622, complete genomePrkA protein6e-49196
NC_015948:1590297:1621146162114616232182073Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeputative serine protein kinase, PrkA2e-44180
NC_014729:1248782:1276022127602212780942073Halogeometricum borinquense DSM 11551 chromosome, complete genomeser protein kinase6e-44179
NC_012029:11986:3599835998380732076Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomeputative serine protein kinase, PrkA1e-42175