Pre_GI: BLASTP Hits

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Query: NC_016822:1431200:1435815 Shigella sonnei 53G, complete genome

Start: 1435815, End: 1437098, Length: 1284

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:2514544:2529800252980025310831284Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein0789
NC_015566:2957956:2964382296438229656531272Serratia sp. AS12 chromosome, complete genomehypothetical protein0751
NC_017047:2260118:2281660228166022829341275Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein0733
NC_015497:3497680:3499656349965635009391284Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein2e-157555
NC_016002:3077648:3088494308849430897651272Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein9e-139493
NC_009434:796878:8236628236628249331272Pseudomonas stutzeri A1501, complete genomehypothetical protein4e-133474
NC_008702:2259430:2277682227768222789501269Azoarcus sp. BH72, complete genomeconserved hypothetical protein9e-133473
NC_012559:1064821:1075652107565210769291278Laribacter hongkongensis HLHK9, complete genomeDUF444 domain containing protein2e-130466
NC_014722:1467996:1485418148541814866891272Burkholderia rhizoxinica HKI 454, complete genomeglycosyltransferase1e-121436
NC_016622:282631:2888422888422901341293Azospirillum lipoferum 4B, complete genomehypothetical protein4e-103375
NC_008789:1837493:1846822184682218481021281Halorhodospira halophila SL1, complete genomeprotein of unknown function DUF4442e-100366
NC_014393:139690:1416191416191427881170Clostridium cellulovorans 743B chromosome, complete genomesporulation protein YhbH5e-39162
NC_014152:2056991:2058428205842820595791152Thermincola sp. JR, complete genomesporulation protein YhbH3e-37156
NC_007503:1047577:1067567106756710687031137Carboxydothermus hydrogenoformans Z-2901, complete genomehypothetical protein9e-35148
NC_010337:147664:1840111840111851501140Heliobacterium modesticaldum Ice1, complete genomestress response protein yhbh, putative9e-32138
NC_007760:1415663:1424835142483514259411107Anaeromyxobacter dehalogenans 2CP-C, complete genomeprotein of unknown function DUF4441e-31137
NC_013205:526281:5319775319775331281152Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,sporulation protein YhbH4e-31136
NC_014829:1526401:1543359154335915445221164Bacillus cellulosilyticus DSM 2522 chromosome, complete genomesporulation protein YhbH1e-30134
NC_011891:3004000:3009750300975030108561107Anaeromyxobacter dehalogenans 2CP-1, complete genomeprotein of unknown function DUF4442e-29130
NC_008095:7211395:7223606722360672247151110Myxococcus xanthus DK 1622, complete genomehypothetical protein3e-29130
NC_015711:4033975:4041988404198840430971110Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein3e-29129
NC_017030:7967192:7978089797808979791981110Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein4e-29129
NC_020126:8287556:8299226829922683003351110Myxococcus stipitatus DSM 14675, complete genomehypothetical protein1e-28127
NC_010162:2406976:2406976240697624081931218Sorangium cellulosum 'So ce 56', complete genomehypothetical protein1e-28127
NC_013385:1064188:1085818108581810869331116Ammonifex degensii KC4, complete genomeprotein of unknown function DUF4447e-27122
NC_013967:2641433:2684746268474626860651320Haloferax volcanii DS2 chromosome, complete genomeglycosyltransferase8e-1788.6
NC_014729:1248782:1272425127242512737501326Halogeometricum borinquense DSM 11551 chromosome, complete genomehypothetical protein5e-1685.9
NC_015948:1590297:1625491162549116268041314Haloarcula hispanica ATCC 33960 chromosome chromosome I, completehypothetical protein2e-1480.9
NC_012029:11986:3218232182335641383Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomeprotein of unknown function DUF4444e-1169.7