Pre_GI: BLASTP Hits

Some Help

Query: NC_016812:258500:283523 Sinorhizobium fredii HH103, complete genome

Start: 283523, End: 284560, Length: 1038

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:983572:995769995769996758990Methylobacterium nodulans ORS 2060, complete genomeintegrase family protein2e-100366
NC_013206:21288:386753867539646972Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446integrase family protein1e-73276
NC_013958:29548:341623416235157996Nitrosococcus halophilus Nc4 plasmid pNHAL01, complete sequenceintegrase domain protein SAM domain protein4e-56218
NC_008573:195317:2039462039462049681023Shewanella sp. ANA-3 plasmid 1, complete sequencephage integrase family protein2e-48193
NC_012988:3288253:330339033033903304355966Methylobacterium extorquens DM4, complete genomeintegrase5e-47188
NC_011138:3182807:3198680319868031996901011Alteromonas macleodii 'Deep ecotype', complete genomePhage integrase3e-46186
NC_008750:2332000:2337459233745923387091251Shewanella sp. W3-18-1, complete genomephage integrase family protein5e-44178
NC_009439:2427120:247785424778542478813960Pseudomonas mendocina ymp, complete genomephage integrase family protein6e-42171
NC_013732:136673:143650143650144639990Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequenceintegrase family protein5e-41168
NC_009659:1923925:196707519670751968007933Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein S7e-41167
NC_019012:61360:825028250283473972Fibrella aestuarina BUZ 2 plasmid pFAES01, complete sequenceIntegrase/recombinase xerD-like protein8e-41167
NC_020541:2191600:220585722058572206834978Rhodanobacter sp. 2APBS1, complete genomesite-specific recombinase XerC8e-41167
NC_020541:2264521:227697222769722277952981Rhodanobacter sp. 2APBS1, complete genomesite-specific recombinase XerC8e-41167
NC_018080:3088866:312118031211803122172993Pseudomonas aeruginosa DK2 chromosome, complete genomephage integrase family protein8e-41167
NC_010501:2511887:253435325343532535288936Pseudomonas putida W619, complete genomeintegrase family protein1e-39164
NC_015410:2698572:271550727155072716487981Pseudomonas mendocina NK-01 chromosome, complete genomephage integrase family protein3e-39162
NC_009659:1984980:198761919876191988593975Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein S3e-39162
NC_010511:3674178:372811937281193729042924Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein5e-39162
NC_011662:2374955:238053023805302381471942Thauera sp. MZ1T, complete genomeintegrase family protein9e-39160
NC_008463:3168837:318711031871103188081972Pseudomonas aeruginosa UCBPP-PA14, complete genomeCointegrate resolution protein S3e-38159
NC_009656:3127240:316451031645103165481972Pseudomonas aeruginosa PA7 chromosome, complete genomecointegrate resolution protein S3e-38159
NC_018080:3088866:309571130957113096682972Pseudomonas aeruginosa DK2 chromosome, complete genomecointegrate resolution protein S3e-38159
NC_009138:1518315:152966615296661530664999Herminiimonas arsenicoxydans, complete genomeunknown prophage; integrase-like protein (Cointegrate resolution protein S) (partial)3e-38159
NC_013166:1341575:135602813560281356969942Kangiella koreensis DSM 16069, complete genomeintegrase family protein5e-38158
NC_018524:4848154:4876338487633848775551218Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomephage integrase family protein6e-38158
NC_017986:5867782:586819858681985869166969Pseudomonas putida ND6 chromosome, complete genomecointegrase3e-37155
NC_007508:2756945:2770341277034127716151275Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecointegrate resolution protein S8e-36151
NC_016147:623666:6367486367486380191272Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative phage integrase7e-35147
NC_014210:2597000:2611347261134726125881242Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein2e-33143
NC_010510:409469:416469416469417404936Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein2e-33143
NC_006672:47610:4761047610490581449Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceIntegrase-like protein1e-29130
NC_007333:1743890:1790694179069417917251032Thermobifida fusca YX, complete genomeputative integrase/recombinase4e-29129
NC_007507:101887:123354123354124199846Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative cointegrate resolution protein S6e-29128
NC_017075:2733898:2742785274278527438431059Rubrivivax gelatinosus IL144, complete genomeintegrase family protein1e-28127
NC_013235:3129384:313222031322203133188969Nakamurella multipartita DSM 44233, complete genomeintegrase family protein4e-27122
NC_013211:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-020, completephage DNA recombinase3e-27122
NC_017105:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-01-42C plasmid pAPA42C_020,phage DNA recombinase3e-27122
NC_017113:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-020, completephage DNA recombinase3e-27122
NC_017118:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-020, completephage DNA recombinase3e-27122
NC_017122:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-020, completephage DNA recombinase3e-27122
NC_017126:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-020, completephage DNA recombinase3e-27122
NC_017131:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-020, completephage DNA recombinase3e-27122
NC_017149:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-020, completephage DNA recombinase3e-27122
NC_014159:37920:5369553695548791185Tsukamurella paurometabola DSM 20162 plasmid pTpau01, completeintegrase family protein9e-27121
NC_017986:5797044:5815353581535358164681116Pseudomonas putida ND6 chromosome, complete genomephage integrase2e-24113
NC_010510:388885:3984003984003994611062Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein2e-24113
NC_011887:110618:1319371319371329981062Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeintegrase family protein3e-24112
NC_007677:771168:8244758244758265382064Salinibacter ruber DSM 13855, complete genomePhage integrase, N-terminal SAM-like domain protein7e-24111
NC_003037:1245645:1264010126401012651671158Sinorhizobium meliloti 1021 plasmid pSymA, complete sequencepossible integrase-like protein4e-23108
NC_012988:2455807:2500951250095125021231173Methylobacterium extorquens DM4, complete genomeintegrase/recombinase protein5e-23108
NC_011758:247666:2655772655772666381062Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeintegrase family protein6e-23108
NC_014032:825793:9156479156479177042058Salinibacter ruber M8 chromosome, complete genometyrosine recombinase XerD3e-22106
NC_011071:2207385:2213586221358622146651080Stenotrophomonas maltophilia R551-3, complete genomeintegrase family protein2e-20100
NC_010943:2499092:2500946250094625021151170Stenotrophomonas maltophilia K279a, complete genomeputative integrase3e-2099.8
NC_009621:389181:3891813891813903561176Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequencephage integrase family protein5e-2099
NC_010162:1767296:177939417793941780293900Sorangium cellulosum 'So ce 56', complete genomeintegrase-like protein8e-2098.2
NC_009656:3127240:314265631426563143531876Pseudomonas aeruginosa PA7 chromosome, complete genomecointegrase1e-1997.8
NC_008739:41793:6420664206653481143Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencephage integrase family protein2e-1997.1
NC_007507:101887:104425104425105138714Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative cointegrate resolution protein S5e-1995.5
NC_014541:2122788:212976021297602130719960Ferrimonas balearica DSM 9799 chromosome, complete genomeintegrase family protein1e-1894.4
NC_010943:2499092:251503325150332515743711Stenotrophomonas maltophilia K279a, complete genomeputative integrase2e-1893.6
NC_008781:2108893:2114995211499521160711077Polaromonas naphthalenivorans CJ2, complete genomephage integrase family protein1e-1790.9
NC_008536:8541267:856873485687348569168435Solibacter usitatus Ellin6076, complete genomehypothetical protein4e-1685.9
NC_010162:1767296:178052317805231781320798Sorangium cellulosum 'So ce 56', complete genomeintegrase-like protein5e-1479
NC_018080:3088866:3106744310674431078651122Pseudomonas aeruginosa DK2 chromosome, complete genomephage integrase1e-1377.8
NC_012988:3288253:330557933055793305860282Methylobacterium extorquens DM4, complete genome1e-1377.8
NC_009656:3127240:3143692314369231447921101Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase2e-1273.9
NC_007722:2172000:2192258219225821934601203Erythrobacter litoralis HTCC2594, complete genomeIntegrase-like protein9e-1271.2
NC_013956:4490000:449623744962374497139903Pantoea ananatis LMG 20103 chromosome, complete genomeCre4e-1168.9
NC_016817:185000:1914351914351924721038Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequenceCre recombinase5e-1168.9
NC_013174:1366786:1369043136904313700501008Jonesia denitrificans DSM 20603, complete genomeintegrase family protein1e-1067.4
NC_009455:53000:820568205683015960Dehalococcoides sp. BAV1 chromosome, complete genomephage integrase family protein2e-1067
NC_014220:481923:499188499188500078891Syntrophothermus lipocalidus DSM 12680 chromosome, complete genometyrosine recombinase XerD2e-1067
NC_011138:318168:320211320211321104894Alteromonas macleodii 'Deep ecotype', complete genomesite-specific recombinase, phage integrase family protein3e-1066.6
NC_007275:1:137801378014739960Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completesite-specific recombinase, phage integrase family4e-1065.9
NC_010511:3674178:372000337200033720428426Methylobacterium sp. 4-46 chromosome, complete genome4e-1065.9
NC_011092:9974:249992499925976978Salmonella enterica subsp. enterica serovar Schwarzengrund strintegrase/recombinase7e-1065.1
NC_008269:577111:5820615820615832601200Rhodococcus sp. RHA1 plasmid pRHL1, complete sequenceprobable integrase8e-1065.1
NC_020299:127480:145428145428146327900Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeintegrase/recombinase XerD2e-0963.5
NC_013501:1547508:155309615530961554025930Rhodothermus marinus DSM 4252, complete genomeintegrase family protein2e-0963.2
NC_019815:761480:775648775648776571924Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiintegrase/recombinase XerD3e-0962.8
NC_016628:193000:215655215655216623969Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceDNA integration/recombination/inversion protein5e-0962.4
NC_013508:26348:464454644547365921Edwardsiella tarda EIB202, complete genomeputative integrase4e-0962.4
NC_020291:4357425:436516743651674366105939Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometyrosine recombinase XerC6e-0962
NC_018679:2412000:2419493241949324206891197Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeSite-specific recombinase XerD-like protein6e-0962
NC_009454:1246393:124639312463931247280888Pelotomaculum thermopropionicum SI, complete genomesite-specific recombinase XerD8e-0961.6
NC_015554:3808529:380761938076193808536918Alteromonas sp. SN2 chromosome, complete genomephage integrase family site-specific recombinase9e-0961.2
NC_017986:5833819:584824158482415848717477Pseudomonas putida ND6 chromosome, complete genomephage integrase1e-0861.2
NC_008609:251608:281900281900282808909Pelobacter propionicus DSM 2379, complete genometyrosine recombinase XerC1e-0861.2
NC_016616:2699350:275244127524412753355915Dechlorosoma suillum PS chromosome, complete genometyrosine recombinase XerD1e-0860.8
NC_018012:4054000:405605640560564056955900Thiocystis violascens DSM 198 chromosome, complete genometyrosine recombinase XerD2e-0860.5
NC_010625:1602191:160771416077141608592879Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceintegrase family protein2e-0860.1
NC_014841:248487:2552092552092562461038Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceintegrase family protein4e-0859.3
NC_016048:2055199:2072316207231620733231008Oscillibacter valericigenes Sjm18-20, complete genometyrosine recombinase XerC4e-0859.3
NC_004347:4007847:403063740306374031569933Shewanella oneidensis MR-1, complete genomesite-specific recombinase, phage integrase family6e-0858.9
NC_008321:3815940:384562938456293846561933Shewanella sp. MR-4, complete genomephage integrase family protein6e-0858.5
NC_008228:816000:828671828671829588918Pseudoalteromonas atlantica T6c, complete genomephage integrase6e-0858.5
NC_007274:72979:811318113182093963Pseudomonas syringae pv. phaseolicola 1448A large plasmid, completesite-specific recombinase, phage integrase family1e-0757.8
NC_020291:2291418:231343723134372314300864Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomesite-specific recombinase XerD4e-0756.2
NC_007005:5500196:550962255096225510575954Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase:Phage integrase, N-terminal SAM-like5e-0755.8
NC_010627:233572:233572233572234450879Burkholderia phymatum STM815 plasmid pBPHY02, complete sequenceintegrase family protein6e-0755.5
NC_014355:243543:260538260538261491954Candidatus Nitrospira defluvii, complete genometyrosine recombinase xerC6e-0755.5
NC_014377:1060000:106688810668881067784897Thermosediminibacter oceani DSM 16646 chromosome, complete genometyrosine recombinase XerC8e-0755.1
NC_008536:435221:442656442656443567912Solibacter usitatus Ellin6076, complete genomephage integrase family protein1e-0654.3
NC_010336:1117325:114564911456491146527879Francisella philomiragia subsp. philomiragia ATCC 25017, completesite-specific recombinase1e-0654.3
NC_015731:3077842:308153530815353082446912Nitrosomonas sp. Is79A3 chromosome, complete genomeTyrosine recombinase xerD1e-0653.9
NC_016937:141984:170101170101170979879Francisella tularensis subsp. tularensis TI0902 chromosome,tyrosine recombinase XerD2e-0653.9
NC_016933:141984:170101170101170979879Francisella tularensis TIGB03 chromosome, complete genometyrosine recombinase XerD2e-0653.9
NC_005773:866157:887878887878888834957Pseudomonas syringae pv. phaseolicola 1448A, complete genomesite-specific recombinase, phage integrase family2e-0653.9
NC_006570:141966:170083170083170961879Francisella tularensis subsp. tularensis Schu 4, complete genomeIntegrase/recombinase2e-0653.9
NC_008245:141982:170099170099170977879Francisella tularensis subsp. tularensis FSC 198, complete genomeIntegrase/recombinase2e-0653.9
NC_010677:214712:242702242702243580879Francisella tularensis subsp. mediasiatica FSC147, complete genometyrosine recombinase XerD2e-0653.5
NC_009257:226417:254534254534255412879Francisella tularensis subsp. tularensis WY96-3418 chromosome,tyrosine recombinase XerD2e-0653.5
NC_007507:101887:104170104170104373204Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,cointegrate resolution protein S fragment3e-0653.1
NC_008726:494769:4958984958984969471050Mycobacterium vanbaalenii PYR-1, complete genomephage integrase family protein4e-0652.8
NC_011901:39215:460684606846964897Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetyrosine recombinase XerC4e-0652.4
NC_020064:3825916:384373738437373844636900Serratia marcescens FGI94, complete genometyrosine recombinase XerD8e-0651.6
NC_015952:171707:1861581861581877201563Streptomyces violaceusniger Tu 4113 plasmid pSTRVI02, completeRecombination endonuclease VII1e-0551.2