Pre_GI: BLASTP Hits

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Query: NC_016582:93754:110670 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 110670, End: 111338, Length: 669

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019970:1991944:199346519934651994091627Thermoanaerobacterium thermosaccharolyticum M0795, complete genomelysophospholipase L1-like esterase6e-39160
NC_010003:449192:470640470640471266627Petrotoga mobilis SJ95, complete genomelipolytic protein G-D-S-L family7e-33140
NC_015671:2371632:238966823896682390309642Cellvibrio gilvus ATCC 13127 chromosome, complete genomeG-D-S-L family lipolytic protein2e-28125
NC_009615:3756196:377380337738033774573771Parabacteroides distasonis ATCC 8503 chromosome, complete genomelysophospholipase L1-like protein7e-1890.5
NC_020210:1908000:192054519205451921198654Geobacillus sp. GHH01, complete genomelipolytic protein7e-1890.5
NC_014206:1745203:175461117546111755264654Geobacillus sp. C56-T3 chromosome, complete genomeG-D-S-L family lipolytic protein1e-1789.7
NC_015500:987641:101214510121451012789645Treponema brennaborense DSM 12168 chromosome, complete genomelipolytic protein G-D-S-L family4e-1788.2
NC_014623:659422:673984673984674649666Stigmatella aurantiaca DW4/3-1 chromosome, complete genomelipolytic protein, gdsl family3e-1479