Pre_GI: BLASTP Hits

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Query: NC_016582:7737930:7737571 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 7737571, End: 7737933, Length: 363

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008261:381297:395893395893396303411Clostridium perfringens ATCC 13124, complete genomehypothetical protein7e-1475.9
NC_014019:3543389:356454035645403564905366Bacillus megaterium QM B1551 chromosome, complete genomehypothetical protein1e-1168.6
NC_011653:748844:768776768776769150375Thermosipho africanus TCF52B, complete genomehypothetical protein3e-1167
NC_015589:2878000:287820328782032878574372Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehypothetical protein1e-0962
NC_011295:1120584:112023211202321120597366Coprothermobacter proteolyticus DSM 5265, complete genomehypothetical protein9e-0958.9
NC_013721:533048:547461547461547754294Gardnerella vaginalis 409-05, complete genomehypothetical protein5e-0856.2
NS_000195:1257834:125920712592071259515309Candidatus Cloacamonas acidaminovoranshypothetical protein5e-0753.1