Pre_GI: BLASTP Hits

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Query: NC_016582:7033000:7048260 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 7048260, End: 7049270, Length: 1011

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016111:3052494:3068219306821930692291011Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-129462
NC_016109:3963189:3977772397777239787821011Kitasatospora setae KM-6054, complete genomehypothetical protein3e-105381
NC_013757:780835:7964987964987974991002Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein4e-44179
NC_014507:2174500:2185217218521721862421026Methanoplanus petrolearius DSM 11571 chromosome, complete genomehypothetical protein1e-35150
NC_008095:4189082:4202114420211442031451032Myxococcus xanthus DK 1622, complete genomehypothetical protein3e-30132
NC_009464:650997:661342661342662208867Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein3e-23109
NC_013061:1052957:1091199109119910922001002Pedobacter heparinus DSM 2366, complete genomehypothetical protein1e-1584
NC_015138:5046921:5060607506060750616171011Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein8e-1374.7
NC_008700:312099:3260373260373270531017Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein4e-1272.8
NC_014010:1392536:1430961143096114319621002Candidatus Puniceispirillum marinum IMCC1322 chromosome, completehypothetical protein6e-1272
NC_009138:1843998:1855489185548918565021014Herminiimonas arsenicoxydans, complete genomehypothetical protein8e-1271.6
NC_012968:2000218:201799420179942018935942Methylotenera mobilis JLW8, complete genomehypothetical protein9e-1271.2
NC_009848:720510:7320897320897331171029Bacillus pumilus SAFR-032, complete genomehypothetical protein8e-1168.2
NC_014311:1:150021500215820819Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein1e-1067.4
NC_016641:2587000:2598357259835725993671011Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein2e-1067
NC_020908:1889759:1900487190048719014941008Octadecabacter arcticus 238, complete genomehypothetical protein2e-1066.6
NC_008686:2080770:2091956209195620929601005Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein3e-0963.2
NC_019842:3755275:3789454378945437904731020Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein5e-0962
NC_017188:3764061:3777230377723037782491020Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein6e-0858.5
NC_017190:3812065:3824028382402838250471020Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein6e-0858.5
NC_017191:3766960:3778922377892237799411020Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein6e-0858.5
NC_014551:3797047:380903638090363810025990Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein6e-0858.5
NC_007577:353755:353755353755354747993Prochlorococcus marinus str. MIT 9312, complete genomehypothetical protein4e-0756.2
NC_016582:7033000:705430870543087055024717Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-0551.2