Pre_GI: BLASTP Hits

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Query: NC_016582:4934854:4951065 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 4951065, End: 4952039, Length: 975

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018524:4848154:488430348843034885154852Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeADP-ribosylglycohydrolase family protein3e-37155
NC_014210:2597000:259781325978132598754942Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,ADP-ribosylation/Crystallin J13e-33142
NC_015437:1066014:1091684109168410938522169Selenomonas sputigena ATCC 35185 chromosome, complete genomeADP-ribosylation/Crystallin J11e-0757.4
NC_015578:2428500:242936424293642430167804Treponema primitia ZAS-2 chromosome, complete genomeADP-ribosylglycohydrolase family protein2e-0757
NC_014731:296000:3193903193903207181329Halogeometricum borinquense DSM 11551 plasmid pHBOR02, completeADP-ribosylglycohydrolase6e-0755.1
NC_007604:1586243:161880016188001619696897Synechococcus elongatus PCC 7942, complete genomeADP-ribosylglycohydrolase-like7e-0651.6