Pre_GI: BLASTP Hits

Some Help

Query: NC_016582:4073850:4076271 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 4076271, End: 4077284, Length: 1014

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015635:2001539:2002373200237320038481476Microlunatus phosphovorus NM-1, complete genomeputative glycosyltransferase3e-1582.8
NC_017150:255474:263441263441264211771Acetobacter pasteurianus IFO 3283-01-42C, complete genomeglycosyl transferase family protein1e-1067.8
NC_009523:5104413:5125245512524551283433099Roseiflexus sp. RS-1 chromosome, complete genomeglycosyl transferase family protein3e-1066.2
NC_009523:5104413:5124238512423851252481011Roseiflexus sp. RS-1 chromosome, complete genomeglycosyl transferase family protein6e-0962
NC_011884:1541256:1568244156824415703132070Cyanothece sp. PCC 7425, complete genomeglycosyl transferase family 22e-0860.5
NC_014962:4538122:455132945513294552240912Isosphaera pallida ATCC 43644 chromosome, complete genomefamily 2 glycosyl transferase4e-0755.8
NC_015677:896673:910912910912911904993Ramlibacter tataouinensis TTB310 chromosome, complete genomeb-glycosyltransferase1e-0551.2