Pre_GI: BLASTP Hits

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Query: NC_016582:3268857:3279716 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 3279716, End: 3280588, Length: 873

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008278:3169500:318308731830873183941855Frankia alni ACN14a, complete genomehypothetical protein3e-67254
NC_014376:869749:8770978770978783201224Clostridium saccharolyticum WM1 chromosome, complete genomeRadical SAM domain protein3e-2099
NC_015737:2691246:2700798270079827020181221Clostridium sp. SY8519, complete genomeputative Fe-S oxidoreductase9e-1477.8
NC_008701:37219:4525245252464211170Pyrobaculum islandicum DSM 4184, complete genomeRadical SAM domain protein4e-1375.5
NC_002754:1661000:1665410166541016665461137Sulfolobus solfataricus P2, complete genomeCoenzyme PQQ synthesis protein E (pqqE-4)9e-1271.2
NC_012622:940990:9590429590429601781137Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeradical SAM protein5e-1065.5
NC_012623:1631985:1631985163198516331211137Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeradical SAM protein5e-1065.5
NC_015500:484984:4982864982864998001515Treponema brennaborense DSM 12168 chromosome, complete genomeRadical SAM domain protein5e-1065.1
NC_003552:661579:6772296772296782781050Methanosarcina acetivorans C2A, complete genomeheme d1 biosynthesis protein NirJ5e-1065.1
NC_020304:129321:1501321501321511661035Desulfocapsa sulfexigens DSM 10523, complete genomeradical SAM additional 4Fe4S-binding domain-containing protein1e-0963.5
NC_014666:300571:3133143133143144771164Frankia sp. EuI1c chromosome, complete genomeRadical SAM domain protein2e-0963.5
NC_014500:1862000:1896102189610218975291428Dickeya dadantii 3937 chromosome, complete genomeRadical SAM domain heme biosynthesis protein5e-0962
NC_015416:1039144:104021210402121041177966Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein6e-0961.6
NC_018867:1161648:1172852117285211739761125Dehalobacter sp. CF chromosome, complete genomeRadical SAM domain protein7e-0961.2
NC_013204:3419817:3428723342872334301501428Eggerthella lenta DSM 2243, complete genomeRadical SAM domain protein7e-0858.2
NC_020389:1777409:179374717937471794421675Methanosarcina mazei Tuc01, complete genomeRadical SAM domain heme biosynthesis protein7e-0858.2
NC_018876:2380018:2394099239409923951541056Methanolobus psychrophilus R15 chromosome, complete genomeradical SAM family Fe-S protein9e-0857.8
NC_011979:2641500:265498226549822655932951Geobacter sp. FRC-32, complete genomeRadical SAM domain protein1e-0757.8
NC_014960:1735786:1753105175310517545201416Anaerolinea thermophila UNI-1, complete genomehypothetical protein4e-0755.8
NC_014033:2080818:2095787209578720971241338Prevotella ruminicola 23 chromosome, complete genomeputative Fe-S oxidoreductase8e-0754.7
NC_013131:10370765:1038152010381520103826321113Catenulispora acidiphila DSM 44928, complete genomeRadical SAM domain protein1e-0653.9
NC_015873:1193843:1203710120371012050201311Megasphaera elsdenii DSM 20460, complete genomehypothetical protein2e-0653.1
NC_007645:3756654:3760070376007037613471278Hahella chejuensis KCTC 2396, complete genomepredicted Fe-S oxidoreductase5e-0652
NC_009776:617532:6305306305306315881059Ignicoccus hospitalis KIN4/I, complete genomeRadical SAM domain protein5e-0652
NC_010814:3332088:3341308334130833423721065Geobacter lovleyi SZ, complete genomeRadical SAM domain protein1e-0550.8