Pre_GI: BLASTP Hits

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Query: NC_016582:175589:189374 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 189374, End: 192223, Length: 2850

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009328:1867971:1871978187197818740322055Geobacillus thermodenitrificans NG80-2 chromosome, complete genomealpha-glucuronidase2e-178627
NC_013406:1217385:1222498122249812245792082Paenibacillus sp. Y412MC10 chromosome, complete genomealpha-glucuronidase2e-178626
NC_013411:2739989:2748386274838627504372052Geobacillus sp. Y412MC61, complete genomeAlpha-glucuronidase7e-176618
NC_014915:1880748:1888324188832418903752052Geobacillus sp. Y412MC52 chromosome, complete genomeAlpha-glucuronidase7e-176618
NC_014410:989698:9955319955319976002070Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Alpha-glucuronidase1e-161570
NC_019970:929666:9365009365009385692070Thermoanaerobacterium thermosaccharolyticum M0795, complete genomealpha-glucuronidase1e-160567
NC_015555:1792242:1802535180253518046042070Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeAlpha-glucuronidase9e-158558
NC_014655:2533929:2552934255293425550002067Leadbetterella byssophila DSM 17132 chromosome, complete genomealpha-glucuronidase5e-142505
NC_015588:475723:4911494911494931642016Isoptericola variabilis 225 chromosome, complete genomeAlpha-glucuronidase7e-134478
NC_009614:29604:3621236212382572046Bacteroides vulgatus ATCC 8482 chromosome, complete genomealpha-glycosidase2e-132474
NC_013530:423540:4371404371404391792040Xylanimonas cellulosilytica DSM 15894, complete genomeAlpha-glucuronidase6e-127455
NC_018720:311844:3249283249283269552028Bifidobacterium asteroides PRL2011 chromosome, complete genomealpha-glucuronidase9e-126451
NC_015389:616430:6561816561816582082028Coriobacterium glomerans PW2 chromosome, complete genomealpha-glucuronidase3e-122439
NC_010003:225420:2388492388492398511003Petrotoga mobilis SJ95, complete genome3e-1894.4