Pre_GI: BLASTP Hits

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Query: NC_016582:175589:181764 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 181764, End: 181910, Length: 147

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019673:3559185:3562156356215635632291074Saccharothrix espanaensis DSM 44229 complete genomeLuciferase-like monooxygenase6e-1269.7
NC_016786:1359064:1443656144365614447741119Corynebacterium diphtheriae HC01 chromosome, complete genomeputative oxidoreductase2e-1167.8
NC_016802:1317365:1428178142817814292961119Corynebacterium diphtheriae HC02 chromosome, complete genomeputative oxidoreductase2e-1167.8
NC_016783:1397975:1463983146398314651011119Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative oxidoreductase2e-1167.8
NC_016801:1422500:1485170148517014862911122Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative oxidoreductase2e-1167.4
NC_016785:1407892:1421558142155814226761119Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative oxidoreductase2e-1167.4
NC_016789:1432000:1488882148888214900001119Corynebacterium diphtheriae PW8 chromosome, complete genomeputative oxidoreductase2e-1167.4
NC_016799:1439000:1495194149519414963121119Corynebacterium diphtheriae 31A chromosome, complete genomeputative oxidoreductase2e-1167.4
NC_009921:6447151:6467511646751164689561446Frankia sp. EAN1pec, complete genomeluciferase family protein6e-1166.2
NC_013174:1366786:1367463136746313685931131Jonesia denitrificans DSM 20603, complete genomeLuciferase-like monooxygenase2e-1064.7
NC_013169:2045000:2061011206101120621651155Kytococcus sedentarius DSM 20547, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase2e-1064.3
NC_015673:397947:414034414034414543510Corynebacterium resistens DSM 45100 chromosome, complete genomeputative oxidoreductase1e-0755.1
NC_010545:1781393:1799895179989518010131119Corynebacterium urealyticum DSM 7109, complete genomeputative oxidoreductase2e-0754.3