Pre_GI: BLASTP Hits

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Query: NC_016582:1639375:1652013 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 1652013, End: 1652366, Length: 354

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015947:1290614:131473613147361315095360Burkholderia sp. JV3 chromosome, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase5e-1786.3
NC_010510:409469:417947417947418480534Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completehypothetical protein3e-1580.5
NC_009664:4696961:473126447312644731845582Kineococcus radiotolerans SRS30216, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase5e-1476.3
NC_008570:3220539:327748932774893277857369Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeglyoxalase family protein1e-1168.2
NC_018524:4988810:500333250033325003862531Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeglyoxalase-like domain protein3e-0960.8
NC_018681:5378197:539451753945175394897381Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein1e-0858.9
NC_016935:4367000:439361243936124394001390Paenibacillus mucilaginosus 3016 chromosome, complete genomeglyoxalase family protein1e-0858.5
NC_015690:4643869:465662146566214657010390Paenibacillus mucilaginosus KNP414 chromosome, complete genomeglyoxalase family protein1e-0858.5