Pre_GI: BLASTP Hits

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Query: NC_016582:10287865:10303498 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10303498, End: 10303797, Length: 300

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014246:1991093:201116120111612011466306Mobiluncus curtisii ATCC 43063 chromosome, complete genomehypothetical protein6e-2199.4
NC_014616:1415951:143612014361201436413294Bifidobacterium bifidum S17 chromosome, complete genomehypothetical protein5e-1682.8
NC_015683:1432995:145603414560341456327294Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein7e-1372.8
NC_015145:92397:116525116525116827303Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomehypothetical protein1e-1271.6
NC_016786:1359064:140895114089511409244294Corynebacterium diphtheriae HC01 chromosome, complete genomehypothetical protein2e-1271.2
NC_016785:1357500:138683913868391387132294Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomehypothetical protein2e-1271.2
NC_016783:1397975:142927714292771429570294Corynebacterium diphtheriae INCA 402 chromosome, complete genomehypothetical protein2e-1271.2
NC_016782:1385800:140868614086861408979294Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein2e-1271.2
NC_002935:1378566:142034414203441420637294Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein2e-1271.2
NC_016787:1350676:140025214002521400545294Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein2e-1271.2
NC_016788:1376000:140371714037171404010294Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein2e-1271.2
NC_016802:1317365:139347613934761393769294Corynebacterium diphtheriae HC02 chromosome, complete genomehypothetical protein2e-1271.2
NC_016801:1422500:145048014504801450773294Corynebacterium diphtheriae C7 (beta) chromosome, complete genomehypothetical protein2e-1271.2
NC_016800:1411000:143682714368271437120294Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein2e-1271.2
NC_016799:1439000:146049614604961460789294Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein2e-1271.2
NC_016790:1345638:137631913763191376612294Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein2e-1271.2
NC_017303:1297793:131769113176911317984294Corynebacterium pseudotuberculosis I19 chromosome, complete genomehypothetical protein7e-1269.3
NC_016932:1284000:130259013025901302883294Corynebacterium pseudotuberculosis 316 chromosome, complete genomehypothetical protein7e-1269.3
NC_016781:1297782:131768313176831317976294Corynebacterium pseudotuberculosis 3/99-5 chromosome, completehypothetical protein7e-1269.3
NC_011886:177039:189182189182189484303Arthrobacter chlorophenolicus A6, complete genomehypothetical protein1e-1065.1
NC_016789:1432000:145421714542171454411195Corynebacterium diphtheriae PW8 chromosome, complete genomehypothetical protein2e-0754.7