Pre_GI: BLASTP Hits

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Query: NC_016582:10227196:10245717 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10245717, End: 10246193, Length: 477

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020210:2044944:207156720715672072385819Geobacillus sp. GHH01, complete genomerhamnogalacturonan acetylesterase9e-2199.4
UCMB5137:303641:307041307041307736696Bacillus atrophaeus UCMB-5137rhamnogalacturonan acetylesterase4e-2097.1
NC_015152:2887414:290459229045922905263672Spirochaeta sp. Buddy chromosome, complete genomelipolytic protein G-D-S-L family8e-1992.8
NC_000964:764118:767474767474768172699Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-1890.9
NC_014479:736102:738404738404739099696Bacillus subtilis subsp. spizizenii str. W23 chromosome, completerhamnogalacturonan acetylesterase5e-1890.1
NC_016047:876875:881140881140881835696Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein5e-1890.1
NC_017195:742298:745657745657746352696Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYesT6e-1889.7
NC_014976:2981777:298604229860422986737696Bacillus subtilis BSn5 chromosome, complete genomerhamnogalacturonan acetylesterase6e-1889.7
CP002207:227118:229460229460230155696Bacillus atrophaeus 1942, complete genomerhamnogalacturonan acetylesterase6e-1889.7
NC_014639:227118:229460229460230155696Bacillus atrophaeus 1942 chromosome, complete genomerhamnogalacturonan acetylesterase6e-1889.7
NC_020244:783125:785424785424786122699Bacillus subtilis XF-1, complete genomerhamnogalacturonan acetylesterase6e-1889.7
NC_019896:3281193:329530732953073296002696Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein4e-1787
NC_002570:1195356:1204475120447512055751101Bacillus halodurans C-125, complete genomehypothetical protein9e-1682.4
NC_004663:5437794:5447743544774354489811239Bacteroides thetaiotaomicron VPI-5482, complete genomeputative rhamnogalacturonan acetylesterase3e-1580.9
NC_020291:1810527:182825318282531828933681Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomerhamnogalacturonan acetylesterase RhgT9e-1579.3
NC_014483:1431352:1431352143135214325631212Paenibacillus polymyxa E681 chromosome, complete genomeLysophospholipase L11e-1272.4
NC_016935:2567039:2632372263237226334721101Paenibacillus mucilaginosus 3016 chromosome, complete genomeG-D-S-L family lipolytic protein1e-1272
NC_012997:4672147:467863646786364679496861Teredinibacter turnerae T7901, complete genomecarbohydrate esterase family 12 domain protein5e-1166.6
NC_019960:1232851:1239124123912412441905067Prevotella dentalis DSM 3688 chromosome 1, complete sequencelysophospholipase L1-like esterase3e-0960.8
NC_000964:764118:773475773475774128654Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0755.1
NC_016047:876875:887136887136887789654Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecephalosporin C deacetylase2e-0754.7
NC_014976:2981777:299203429920342992687654Bacillus subtilis BSn5 chromosome, complete genomerhamnogalacturonan acetylesterase2e-0754.7
NC_019896:3281193:328935132893513290004654Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein2e-0754.7
NC_020244:783125:791426791426792079654Bacillus subtilis XF-1, complete genomerhamnogalacturonan acetylesterase3e-0754.3
UCMB5137:303641:313919313919314572654Bacillus atrophaeus UCMB-5137rhamnogalacturonan acetylesterase6e-0753.1