Pre_GI: BLASTP Hits

Some Help

Query: NC_016582:10159486:10178299 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10178299, End: 10179450, Length: 1152

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019892:5542478:5544785554478555460321248Singulisphaera acidiphila DSM 18658 chromosome, complete genomeglycosyltransferase4e-0756.2
NC_012880:3827390:3836392383639238375341143Dickeya dadantii Ech703, complete genomeglycosyl transferase group 18e-0755.1
NC_011283:1690193:1735277173527717364221146Klebsiella pneumoniae 342 chromosome, complete genomemannosyltransferase B2e-0653.9
NC_020181:360500:3965843965843977411158Enterobacter aerogenes EA1509E, complete genomeCOG0438: Glycosyltransferase2e-0653.5
NC_012984:1074721:1087734108773410888191086Lactobacillus plantarum JDM1, complete genomepolysaccharide biosynthesis protein6e-0652.4