Pre_GI: BLASTP Hits

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Query: NC_016582:10159486:10166724 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10166724, End: 10168262, Length: 1539

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013131:9903320:9946653994665399480981446Catenulispora acidiphila DSM 44928, complete genomehypothetical protein6e-41169
NC_015312:1265797:1284093128409312861832091Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein8e-38158
NC_013131:7889127:7907475790747579092171743Catenulispora acidiphila DSM 44928, complete genomehypothetical protein2e-37157
NC_009921:8147947:8178674817867481799091236Frankia sp. EAN1pec, complete genomehypothetical protein1e-30134
NC_009142:2480608:250425125042512505039789Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein6e-25115
NC_014815:6616500:668647066864706687450981Micromonospora sp. L5 chromosome, complete genomehypothetical protein3e-21103
NC_015434:2460053:246518924651892466100912Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein2e-1894
NC_014391:1910273:191123219112321912146915Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein1e-1378.2