Pre_GI: BLASTP Hits

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Query: NC_015957:7408466:7432080 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 7432080, End: 7433060, Length: 981

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009380:1491428:1512341151234115133601020Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein1e-71270
NC_009953:4942500:494594949459494946911963Salinispora arenicola CNS-205 chromosome, complete genomehelix-turn-helix type 11 domain-containing protein7e-24111
NC_013729:4978401:499089449908944991847954Kribbella flavida DSM 17836, complete genomeHelix-turn-helix type 11 domain protein7e-24111
NC_013729:5982000:598555659855565986518963Kribbella flavida DSM 17836, complete genomeHelix-turn-helix type 11 domain protein9e-24111
NC_013169:1845735:186560718656071866323717Kytococcus sedentarius DSM 20547, complete genomepredicted transcriptional regulator6e-23108
NC_013947:5075581:5081866508186650828761011Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein1e-21103
NC_015125:1668780:168712716871271688122996Microbacterium testaceum StLB037, complete genomepredicted transcriptional regulator2e-1996.7
NC_013729:4978401:498611749861174987112996Kribbella flavida DSM 17836, complete genomeHelix-turn-helix type 11 domain protein2e-1996.7
NC_016114:4210173:4212930421293042139641035Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein DeoR6e-1995.1
NC_015671:1865752:188228018822801883251972Cellvibrio gilvus ATCC 13127 chromosome, complete genomeDeoR family transcriptional regulator5e-1685.5
NC_016114:3439273:344138634413863442381996Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein DeoR2e-1479.7
NC_018681:7692560:769893876989387699930993Nocardia brasiliensis ATCC 700358 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein1e-1377.8
NC_016048:3063888:308369630836963084625930Oscillibacter valericigenes Sjm18-20, complete genomeputative DeoR family transcriptional regulator1e-1170.9