Pre_GI: BLASTP Hits

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Query: NC_015957:3067919:3087033 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 3087033, End: 3087626, Length: 594

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010628:1734000:174749817474981748085588Nostoc punctiforme PCC 73102, complete genometranscriptional regulator, TetR family3e-35147
NC_013768:29324:461554615546682528Listeria monocytogenes 08-5923, complete genomehypothetical protein3e-1271.6
NC_013766:29324:461554615546682528Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein3e-1271.6
NC_003210:2879906:289784728978472898374528Listeria monocytogenes EGD-e, complete genomehypothetical protein3e-1271.6
NC_008380:4078670:409749440974944098096603Rhizobium leguminosarum bv. viciae 3841, complete genomeputative TetR family transcriptional regulator7e-1167
NC_008527:125723:127705127705128250546Lactococcus lactis subsp. cremoris SK11, complete genomeTranscriptional regulator2e-1065.5
NC_003295:3421520:346908034690803469694615Ralstonia solanacearum GMI1000, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN3e-1065.1
NC_012850:3454270:347256334725633473165603Rhizobium leguminosarum bv. trifolii WSM1325, complete genometranscriptional regulator, TetR family4e-1064.7
NC_008463:4133700:414613741461374146754618Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transcriptional regulator4e-1064.7
NC_003062:2506959:251996225199622520621660Agrobacterium tumefaciens str. C58 chromosome circular, completehypothetical protein9e-1063.5
NC_003304:2507000:252007525200752520734660Agrobacterium tumefaciens str. C58 chromosome circular, completetranscriptional regulator, TetR family9e-1063.5
NC_007761:3564449:358390635839063584508603Rhizobium etli CFN 42, complete genomeprobable transcriptional regulator protein, TetR family2e-0859.3
NC_014500:842493:846764846764847381618Dickeya dadantii 3937 chromosome, complete genomeTetR family transcriptional regulator2e-0859.3
NC_010994:3666651:368539136853913685993603Rhizobium etli CIAT 652, complete genomeprobable transcriptional regulator protein, TetR family3e-0858.5
NC_010625:1370462:139744613974461398036591Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, TetR family4e-0857.8
NC_011988:1036618:104120510412051041873669Agrobacterium vitis S4 chromosome 2, complete genometranscriptional regulator TetR family2e-0755.5
NC_015183:2483653:250008725000872500746660Agrobacterium sp. H13-3 chromosome, complete genometranscriptional regulator, TetR family4e-0754.7
NC_006177:1060428:107883110788311079454624Symbiobacterium thermophilum IAM 14863, complete genomeTetR family transcriptional regulator3e-0652