Pre_GI: BLASTP Hits

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Query: NC_015761:3698520:3703386 Salmonella bongori NCTC 12419, complete genome

Start: 3703386, End: 3704456, Length: 1071

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004337:3590323:3882279388227938833791101Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-178624
NC_011830:4473583:4486664448666444877341071Desulfitobacterium hafniense DCB-2, complete genomeFAD dependent oxidoreductase2e-58226
NC_007907:3472494:3472494347249434735641071Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-58225