Pre_GI: BLASTP Hits

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Query: NC_015761:1017301:1024569 Salmonella bongori NCTC 12419, complete genome

Start: 1024569, End: 1024958, Length: 390

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012731:2083650:211097721109772111366390Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative prophage membrane protein3e-37153
NC_016612:3314846:333524733352473335636390Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative prophage membrane protein7e-37152
NC_016612:4119410:412651941265194126863345Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative prophage membrane protein1e-26118
NC_014121:1682638:169559516955951695984390Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative prophage membrane protein1e-25115
NC_013850:2182337:220888222088822209277396Klebsiella variicola At-22 chromosome, complete genomehypothetical protein2e-25114
NC_009648:1541699:156470415647041565099396Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-25114
NC_015663:4522109:452804745280474528505459Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-24111
NC_013282:1804909:182429418242941824674381Cronobacter turicensis, complete genomehypothetical protein9e-23105
NC_017047:1906000:191764919176491918029381Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein2e-1684.7
NC_016902:2580774:258633425863342586726393Escherichia coli KO11FL chromosome, complete genomeputative prophage membrane protein3e-1683.6
CP002516:2580774:258633425863342586726393Escherichia coli KO11, complete genomeputative prophage membrane protein3e-1683.6
NC_010694:2189652:219602721960272196407381Erwinia tasmaniensis, complete genomePutative prophage membrane protein9e-1579