Pre_GI: BLASTP Hits

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Query: NC_015761:1017301:1018583 Salmonella bongori NCTC 12419, complete genome

Start: 1018583, End: 1018831, Length: 249

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009792:1770106:177838317783831778631249Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-39161
NC_016856:2812905:281670428167042816883180Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative bacteriophage protein8e-28122
NC_011283:2836000:290265129026512902884234Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-1994.7
NC_009648:1541699:156061215606121560845234Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-1891.7
NC_013850:2182337:220524222052422205463222Klebsiella variicola At-22 chromosome, complete genomehypothetical protein1e-1685.1
NC_017046:2756000:276223527622352762351117Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein2e-1581.3
NC_011080:2761403:276520227652022765318117Salmonella enterica subsp. enterica serovar Newport str. SL254,putative bacteriophage protein2e-1581.3