Pre_GI: BLASTP Hits

Some Help

Query: NC_015733:3923800:3939662 Pseudomonas putida S16 chromosome, complete genome

Start: 3939662, End: 3940003, Length: 342

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:4093610:411130241113024111682381Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, Cro/CI family1e-1995.5
NC_015410:2351464:237594023759402376296357Pseudomonas mendocina NK-01 chromosome, complete genomeregulatory protein5e-1579.7
NC_014323:961825:975609975609976046438Herbaspirillum seropedicae SmR1 chromosome, complete genomeDNA-binding repressor transcription regulator protein7e-0855.8
NC_011002:703194:709760709760710110351Burkholderia cenocepacia J2315 chromosome 3, complete sequenceputative DNA-binding protein7e-0855.8
NC_008060:341851:351916351916352266351Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencetranscriptional regulator, XRE family9e-0855.8
NC_012721:2694829:270527527052752705745471Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-0755.5
NC_009656:4527457:459407845940784594431354Pseudomonas aeruginosa PA7 chromosome, complete genomeXRE family transcriptional regulator1e-0755.1
NC_011000:3493575:350202535020253502345321Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative phage-related regulator2e-0755.1
NC_008781:3508784:351732735173273517707381Polaromonas naphthalenivorans CJ2, complete genomeputative transcriptional regulator, XRE family7e-0752.8
NC_015563:4959843:497146649714664972185720Delftia sp. Cs1-4 chromosome, complete genomeputative phage repressor1e-0651.6
NC_002927:3827211:386010438601043860469366Bordetella bronchiseptica RB50, complete genomehypothetical protein8e-0649.3