Pre_GI: BLASTP Hits

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Query: NC_015733:1179977:1193176 Pseudomonas putida S16 chromosome, complete genome

Start: 1193176, End: 1193874, Length: 699

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:1307173:131506213150621315856795Klebsiella pneumoniae 342 chromosome, complete genomeP-type conjugative transfer protein TrbJ3e-107387
NC_013422:1732677:175504617550461755798753Halothiobacillus neapolitanus c2, complete genomeP-type conjugative transfer protein TrbJ2e-1789
NC_006371:1743982:175122217512221752001780Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein2e-1582.4
NC_012856:3000839:300677030067703007525756Ralstonia pickettii 12D chromosome 1, complete genomeP-type conjugative transfer protein TrbJ2e-0859.3
NC_011206:1293880:129421712942171294957741Acidithiobacillus ferrooxidans ATCC 53993, complete genomeP-type conjugative transfer protein TrbJ1e-0757
NC_011761:1412420:141242014124201413160741Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeconjugal transfer protein trbJ3e-0755.5
NC_010125:1011430:102995410299541030700747Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein; TrbJ1e-0653.1
NC_008781:2611702:263924926392492639950702Polaromonas naphthalenivorans CJ2, complete genomeconjugal transfer protein TrbJ2e-0652.8
NC_010682:3313944:334532733453273346070744Ralstonia pickettii 12J chromosome 1, complete sequenceP-type conjugative transfer protein TrbJ5e-0651.6
NC_014834:614890:617328617328618056729Rhodopseudomonas palustris DX-1 chromosome, complete genomeP-type conjugative transfer protein TrbJ8e-0650.8