Pre_GI: BLASTP Hits

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Query: NC_015703:4483500:4492705 Runella slithyformis DSM 19594 chromosome, complete genome

Start: 4492705, End: 4493430, Length: 726

Host Lineage: Runella slithyformis; Runella; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: Environment: Fresh water, Host; Isolation: Fresh water lake; USA, Louisiana, Baton; Temp: Psychrophile. This is a species of curved, nonflexible, pink bacteria. The species is of interest because it is able to grow at temperatures as low as 4°C. The species epithet is derived from slithy, a nonsense word from Lewis Carroll's Jabberwocky for a fictional organism that is 'slithy' and the Latin word 'suffix' meaning '-like, in the shape of', yielding the Neo-Latin word 'slithyformis' meaning 'slithy in form'.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015703:4483500:449416244941624494887726Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator2e-65248
NC_013037:5442131:545847354584735459195723Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LytTR family4e-27121
NC_016940:470163:502234502234502953720Saprospira grandis str. Lewin chromosome, complete genometwo component transcriptional regulator, LytTR family protein5e-27121
NC_018721:2872780:287278028727802873505726Psychroflexus torquis ATCC 700755 chromosome, complete genometwo-component system response regulator, LytR/AlgR family8e-26117
NC_013730:1074393:108006810800681080817750Spirosoma linguale DSM 74, complete genometwo component transcriptional regulator, LytTR family3e-25115
NC_015510:1234500:125002412500241250725702Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator8e-24110
NC_015703:2693463:270975827097582710495738Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator1e-22106
NC_014934:11341:366453664537337693Cellulophaga algicola DSM 14237 chromosome, complete genometwo component transcriptional regulator, lyttr family5e-21101
NC_013222:2795919:281526028152602815907648Robiginitalea biformata HTCC2501, complete genometwo-component system response regulator protein3e-2098.6
NC_019968:1084288:112808911280891128805717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family1e-1996.7
NC_019968:1304450:131481713148171315533717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family1e-1996.7
NC_015167:313506:335892335892336584693Cellulophaga lytica DSM 7489 chromosome, complete genomeLytTR family two component transcriptional regulator2e-1996.3
NC_009615:2311352:231296223129622313666705Parabacteroides distasonis ATCC 8503 chromosome, complete genometwo-component system response regulator3e-1995.5
NC_015311:403281:438961438961439716756Prevotella denticola F0289 chromosome, complete genomeLytTr DNA-binding domain-containing protein4e-1995.1
NC_014933:3715467:371826637182663718967702Bacteroides helcogenes P 36-108 chromosome, complete genometwo component transcriptional regulator, LytTR family1e-1893.6
NC_016776:3798108:379737437973743798111738Bacteroides fragilis 638R, complete genomeputative two-component system, response regulator1e-1893.2
NC_006347:3843228:384459438445943845331738Bacteroides fragilis YCH46, complete genometwo-component system response regulator1e-1893.2
NC_003228:3752035:375130137513013752038738Bacteroides fragilis NCTC 9343, complete genomeputative two-component system, response regulator2e-1892.8
NC_006347:2190000:219573921957392196437699Bacteroides fragilis YCH46, complete genometwo-component system response regulator4e-1788.6
NC_003228:2245181:225199322519932252691699Bacteroides fragilis NCTC 9343, complete genomeputative two-component system response regulator4e-1788.6
NC_016776:2237404:224442922444292245127699Bacteroides fragilis 638R, complete genomeputative two-component system response regulator4e-1788.6
NC_015510:1234500:125508212550821255795714Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator4e-1788.2
NC_004663:1499145:151426015142601514958699Bacteroides thetaiotaomicron VPI-5482, complete genometwo-component system response regulator6e-1787.8
NC_020126:7686076:768779776877977688558762Myxococcus stipitatus DSM 14675, complete genomeDNA-binding response regulator2e-1583.2
NC_013730:2558999:258794825879482588718771Spirosoma linguale DSM 74, complete genometwo component transcriptional regulator, LytTR family3e-1582.4
NC_007333:3360000:336380033638003364594795Thermobifida fusca YX, complete genomeresponse regulator receiver3e-1582
NC_014032:338547:361332361332362084753Salinibacter ruber M8 chromosome, complete genomesensory transduction protein lytT5e-1581.6
NC_016609:5890292:591878759187875919545759Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator5e-1374.7
NC_013037:6209424:621057962105796211313735Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LytTR family1e-1273.2
NC_016609:4331359:434517843451784345930753Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator2e-1272.8
NC_016751:1700164:172001917200191720765747Marinitoga piezophila KA3 chromosome, complete genomeresponse regulator of the LytR/AlgR family3e-1272
NC_009828:600349:601856601856602527672Thermotoga lettingae TMO, complete genometwo component transcriptional regulator, LytTR family6e-1271.2
NC_008536:1778500:179196917919691792745777Solibacter usitatus Ellin6076, complete genomeresponse regulator receiver protein1e-1066.6
NC_004668:3053119:306801830680183068746729Enterococcus faecalis V583, complete genomeresponse regulator2e-1066.2
NC_017316:2581781:259771425977142598442729Enterococcus faecalis OG1RF chromosome, complete genomeresponse regulator2e-1066.2
NC_018704:2417902:242905824290582429768711Amphibacillus xylanus NBRC 15112, complete genomeputative two-component system response regulator2e-1065.9
NC_009616:99647:116610116610117290681Thermosipho melanesiensis BI429 chromosome, complete genomeLytTR family two component transcriptional regulator6e-1064.7
NC_010520:1146000:116684911668491167565717Clostridium botulinum A3 str. Loch Maree, complete genomeLytTr DNA-binding domain family1e-0963.5
NC_015510:6653159:666073866607386661478741Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator2e-0962.8
NC_014152:2849991:286797228679722868697726Thermincola sp. JR, complete genometwo component transcriptional regulator, LytTR family3e-0962.4
NC_014363:1973670:198281319828131983520708Olsenella uli DSM 7084 chromosome, complete genometwo component transcriptional regulator, LytTR family3e-0962
NC_015726:3452232:345363334536333454394762Cupriavidus necator N-1 chromosome 1, complete sequenceLytR family transcriptional regulator3e-0962
NC_017025:1735835:174216717421671742898732Flavobacterium indicum GPTSA100-9, complete genomeTwo-component system response regulatory protein, LytTR family4e-0961.6
NC_015589:3852217:386341738634173864118702Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeresponse regulator receiver4e-0961.6
NC_013061:1856969:187473818747381875517780Pedobacter heparinus DSM 2366, complete genomeLytTr DNA-binding region4e-0961.6
NC_014633:583858:604072604072604797726Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator5e-0961.6
NC_009922:42696:456394563946355717Alkaliphilus oremlandii OhILAs, complete genometwo component transcriptional regulator, LytTR family5e-0961.2
NC_002695:2893951:289323528932352893954720Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein8e-0960.8
NC_013008:2889743:288902728890272889746720Escherichia coli O157:H7 str. TW14359 chromosome, complete genometwo-component response-regulatory protein YehT8e-0960.8
NC_013730:1572889:158248115824811583209729Spirosoma linguale DSM 74, complete genometwo component transcriptional regulator, LytTR family8e-0960.8
NC_020126:8984500:898947889894788990179702Myxococcus stipitatus DSM 14675, complete genometwo component transcriptional regulator, LytTR family protein8e-0960.8
NC_014633:837588:857228857228857983756Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator8e-0960.8
NC_012880:1091486:109317110931711093896726Dickeya dadantii Ech703, complete genometwo component transcriptional regulator, LytTR family7e-0960.8
NC_020260:1111130:112837811283781129103726Cronobacter sakazakii Sp291, complete genometwo-component response-regulatory protein YehT1e-0860.1
NC_016609:2951301:298003529800352980781747Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator1e-0860.1
NC_009778:1070000:108629010862901087015726Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0860.1
NC_013731:11605:284162841629144729Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequencetwo component transcriptional regulator, LytTR family2e-0859.7
NC_011830:3904034:392032539203253921080756Desulfitobacterium hafniense DCB-2, complete genometwo component transcriptional regulator, LytTR family2e-0859.3
NC_011750:919953:938353938353939072720Escherichia coli IAI39 chromosome, complete genomeputative two-component response-regulatory protein YehT3e-0858.9
NC_007644:1638083:165823516582351658972738Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, LytR/AlgR family4e-0858.5
NC_008261:576923:593925593925594641717Clostridium perfringens ATCC 13124, complete genomeDNA-binding response regulator5e-0858.2
NC_020126:7285452:730537573053757306187813Myxococcus stipitatus DSM 14675, complete genomeLyTR family two component transcriptional regulator5e-0858.2
NC_016902:1419413:142028314202831421017735Escherichia coli KO11FL chromosome, complete genomeLytTR family two component transcriptional regulator7e-0857.8
NC_016822:2678691:270562327056232706357735Shigella sonnei 53G, complete genomeLytTR family two component transcriptional regulator7e-0857.8
NC_013941:2928000:296958729695872970321735Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein7e-0857.8
CP002516:1419413:142028314202831421017735Escherichia coli KO11, complete genometwo component transcriptional regulator, LytTR family7e-0857.8
NC_004337:2478461:250322425032242503958735Shigella flexneri 2a str. 301, complete genomeputative 2-component transcriptional regulator7e-0857.8
NC_008258:2473000:249696424969642497698735Shigella flexneri 5 str. 8401, complete genomeputative 2-component transcriptional regulator7e-0857.8
NC_010658:2529033:255507825550782555812735Shigella boydii CDC 3083-94, complete genomeresponse regulator7e-0857.8
NC_009792:642881:644563644563645282720Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein9e-0857.4
NC_007575:973559:975967975967976665699Sulfurimonas denitrificans DSM 1251, complete genomeLytR/AlgR family transcriptional regulator1e-0757
NC_013194:1040197:105397910539791054695717Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetwo component transcriptional regulator, LytTR family2e-0756.2
NC_007677:324000:344731344731345489759Salinibacter ruber DSM 13855, complete genomealginate biosynthesis regulatory protein3e-0755.5
NC_007907:2879568:289297128929712893726756Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0755.1
NC_021182:1473535:147521614752161475986771Clostridium pasteurianum BC1, complete genomeresponse regulator of the LytR/AlgR family5e-0755.1
NC_018868:2867500:286792228679222868728807Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeresponse regulator6e-0754.7
NC_020126:5152359:516493051649305165715786Myxococcus stipitatus DSM 14675, complete genomeDNA-binding response regulator1e-0653.5
NC_016048:375676:399488399488400183696Oscillibacter valericigenes Sjm18-20, complete genomeputative two-component response regulator1e-0653.5
NC_020054:3501467:351843235184323519181750Fibrella aestuarina BUZ 2 drat genometwo component transcriptional regulator, LytTR family2e-0652.4
NC_016627:1485799:149181114918111492536726Clostridium clariflavum DSM 19732 chromosome, complete genomeresponse regulator of the LytR/AlgR family4e-0651.6