Pre_GI: BLASTP Hits

Some Help

Query: NC_015410:3209954:3212056 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 3212056, End: 3212763, Length: 708

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:3817261:383489038348903835594705Pseudomonas aeruginosa PA7 chromosome, complete genomeconjugal transfer protein TrbF2e-92338
NC_011992:1381843:138324713832471383951705Acidovorax ebreus TPSY, complete genomeConjugal transfer protein3e-92337
NC_015422:1643000:165986916598691660573705Alicycliphilus denitrificans K601 chromosome, complete genomeconjugal transfer protein TrbF8e-92336
NC_008577:1489643:150018115001811500885705Shewanella sp. ANA-3 chromosome 1, complete sequenceConjugal transfer protein3e-90330
NC_008757:77023:784097840979113705Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeConjugal transfer protein9e-90329
NC_018691:3082000:310480731048073105511705Alcanivorax dieselolei B5 chromosome, complete genomeTrbF-like protein2e-88325
NC_010002:2933909:296132829613282962032705Delftia acidovorans SPH-1, complete genomeConjugal transfer protein2e-86318
NC_014500:894136:898495898495899205711Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbF3e-73274
NC_012912:1295653:131580113158011316505705Dickeya zeae Ech1591, complete genomeConjugal transfer protein7e-72270
NC_009937:4392108:441668044166804417369690Azorhizobium caulinodans ORS 571, complete genomeconjugal transfer protein1e-71269
NC_015381:2859000:287418928741892874896708Burkholderia gladioli BSR3 chromosome 1, complete sequenceconjugal transfer protein TrbF1e-71269
NC_009485:8138314:813966381396638140343681Bradyrhizobium sp. BTAi1 chromosome, complete genomeconjugal transfer protein TrbF3e-68258
NC_009668:529175:540102540102540791690Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceconjugal transfer protein TrbF2e-67255
NC_007925:3911323:392760739276073928290684Rhodopseudomonas palustris BisB18, complete genomeConjugal transfer protein1e-66252
NC_009720:750612:782182782182782871690Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbF3e-66251
NC_008686:1439328:143864214386421439331690Paracoccus denitrificans PD1222 chromosome 1, complete sequenceConjugal transfer protein8e-66249
NC_014834:959986:982544982544983233690Rhodopseudomonas palustris DX-1 chromosome, complete genomeconjugal transfer protein TrbF1e-65249
NC_017249:2109843:211526521152652115948684Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-65248
NC_014834:3472000:350081835008183501501684Rhodopseudomonas palustris DX-1 chromosome, complete genomeconjugal transfer protein TrbF2e-65248
NC_010338:4148667:415366041536604154343684Caulobacter sp. K31, complete genomeConjugal transfer protein5e-65247
NC_008254:534590:556379556379557068690Mesorhizobium sp. BNC1, complete genomeConjugal transfer protein1e-64246
NC_004463:1772541:177492117749211775604684Bradyrhizobium japonicum USDA 110, complete genomeprobable conjugal transfer protein4e-64244
NC_010125:1011430:102773510277351028415681Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein; TrbF8e-64243
NC_014834:614890:619748619748620431684Rhodopseudomonas palustris DX-1 chromosome, complete genomeconjugal transfer protein TrbF1e-63242
NC_009720:4406991:442217044221704422859690Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbF2e-63242
NC_009720:3317642:333550033355003336183684Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbF3e-63241
NC_009720:3210387:321038732103873211070684Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbF3e-63241
NC_010725:3315007:331750833175083318191684Methylobacterium populi BJ001, complete genomeConjugal transfer protein7e-63240
NC_015593:2914384:291571929157192916582864Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeconjugal transfer protein TrbF2e-62238
NC_009720:813157:829603829603830286684Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbF6e-62237
NC_009720:670853:675500675500676189690Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbF9e-62236
NC_010125:2813653:283188928318892832575687Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein trbF1e-60233
NC_014006:2932959:295394429539442954720777Sphingobium japonicum UT26S chromosome 1, complete genomeconjugal transfer protein TrbF2e-60231
NC_011666:1601983:160428216042821604962681Methylocella silvestris BL2, complete genomeConjugal transfer protein2e-60231
NC_013209:2582878:259136425913642592056693Acetobacter pasteurianus IFO 3283-01, complete genomeconjugal transfer protein TrbF9e-58223
NC_010170:4800000:488554648855464886256711Bordetella petrii, complete genomeconjugal transfer protein TrbF2e-56219
NC_015186:491930:493225493225493935711Acidiphilium multivorum AIU301, complete genomeconjugal transfer protein TrbF8e-55213
NC_015186:2839668:285753628575362858246711Acidiphilium multivorum AIU301, complete genomeputative conjugal transfer protein TrbF5e-53207
NC_014500:1862000:188247118824711882758288Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbF5e-1994.4
NC_008781:2611702:264536626453662646019654Polaromonas naphthalenivorans CJ2, complete genomeConjugal transfer protein4e-1581.6
NC_006371:1743982:175426017542601754928669Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical conjugal transfer protein TrbF1e-1273.2
NC_013422:1755875:179195117919511792640690Halothiobacillus neapolitanus c2, complete genomeConjugal transfer protein9e-1270.5
NC_015386:107000:118734118734119438705Treponema succinifaciens DSM 2489 plasmid pTRESU01, complete8e-0960.8
NC_015385:1875671:189654718965471897257711Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein2e-0859.7