Pre_GI: BLASTP Hits

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Query: NC_015410:3209954:3209954 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 3209954, End: 3210688, Length: 735

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015556:2265940:226520922652092265943735Pseudomonas fulva 12-X chromosome, complete genomeP-type conjugative transfer protein TrbJ5e-87320
NC_008577:1489643:149771014977101498453744Shewanella sp. ANA-3 chromosome 1, complete sequenceputative conjugal transfer TrbJ signal peptide protein3e-58224
NC_003295:2787371:278663727866372787374738Ralstonia solanacearum GMI1000, complete genomePROBABLE CONJUGAL TRANSFER TRBJ SIGNAL PEPTIDE PROTEIN1e-55216
NC_018691:3082000:310242131024213103158738Alcanivorax dieselolei B5 chromosome, complete genomeTrbJ-like protein5e-51201
NC_010002:2933909:296373829637382964493756Delftia acidovorans SPH-1, complete genomeP-type conjugative transfer protein TrbJ2e-48192
NC_011992:3752867:375211537521153752870756Acidovorax ebreus TPSY, complete genomeP-type conjugative transfer protein TrbJ1e-47190
NC_014910:2930860:293010829301082930863756Alicycliphilus denitrificans BC chromosome, complete genomep-type conjugative transfer protein trbj3e-47188
NC_012912:1295653:131390413139041314635732Dickeya zeae Ech1591, complete genomeP-type conjugative transfer protein TrbJ4e-45181
NC_014500:894136:896526896526897335810Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbJ2e-44179
NC_015422:1643000:166230116623011663026726Alicycliphilus denitrificans K601 chromosome, complete genomeP-type conjugative transfer protein TrbJ4e-44178
NC_009656:3817261:383732238373223838047726Pseudomonas aeruginosa PA7 chromosome, complete genomeconjugal transfer protein TrbJ3e-43175
NC_015381:2859000:287630828763082877036729Burkholderia gladioli BSR3 chromosome 1, complete sequenceP-type conjugative transfer protein TrbJ7e-43173
NC_010170:4800000:488330348833034884031729Bordetella petrii, complete genomeconjugal transfer protein TrbJ6e-32137
NC_009720:813157:831955831955832716762Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbJ8e-28124
NC_008686:1439328:144098914409891441771783Paracoccus denitrificans PD1222 chromosome 1, complete sequenceconjugal transfer protein TrbJ5e-27121
NC_014834:614890:617328617328618056729Rhodopseudomonas palustris DX-1 chromosome, complete genomeP-type conjugative transfer protein TrbJ9e-26117
NC_014834:959986:980104980104980877774Rhodopseudomonas palustris DX-1 chromosome, complete genomeP-type conjugative transfer protein TrbJ8e-26117
NC_015186:2839668:285992028599202860702783Acidiphilium multivorum AIU301, complete genomeputative conjugal transfer protein TrbJ9e-25114
NC_009937:4392108:441441744144174415169753Azorhizobium caulinodans ORS 571, complete genomeconjugal transfer protein5e-24111
NC_010338:4148667:415112041511204151890771Caulobacter sp. K31, complete genomeP-type conjugative transfer protein TrbJ5e-24111
NC_010725:3315007:331500733150073315768762Methylobacterium populi BJ001, complete genomeP-type conjugative transfer protein TrbJ7e-24110
NC_009720:3317642:333792633379263338684759Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbJ8e-24110
NC_007925:3911323:392997639299763930713738Rhodopseudomonas palustris BisB18, complete genomeputative conjugal transfer protein TrbJ2e-23109
NC_009668:529175:537657537657538439783Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceconjugal transfer protein TrbJ2e-23108
NC_014834:3472000:350310735031073503844738Rhodopseudomonas palustris DX-1 chromosome, complete genomeP-type conjugative transfer protein TrbJ1e-22106
NC_010125:1011430:102995410299541030700747Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein; TrbJ2e-2099.4
NC_009720:670853:673279673279674013735Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbJ4e-2098.6
NC_010125:2813653:283402628340262834760735Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein; TrbJ8e-2097.4
NC_011365:1135750:113575011357501136496747Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeconjugal transfer protein TrbJ1e-1996.7
NC_009720:4406991:442441544244154425149735Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbJ1e-1789.7