Pre_GI: BLASTP Hits

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Query: NC_015410:1202370:1211256 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 1211256, End: 1211990, Length: 735

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015573:2323268:233532623353262335799474Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeHNH endonuclease4e-38158
NC_019974:1184871:1248465124846512498831419Natronococcus occultus SP4, complete genomeputative restriction endonuclease1e-23110
NC_014253:312354:3248563248563262831428Methanohalobium evestigatum Z-7303 chromosome, complete genomeHNH endonuclease1e-22106
NC_017098:986428:995168995168995860693Spirochaeta africana DSM 8902 chromosome, complete genomeputative restriction endonuclease2e-21102
NC_008826:13393:283812838129043663Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencehypothetical protein4e-2098.2
NC_010002:3465509:347135734713573472349993Delftia acidovorans SPH-1, complete genomeHNH endonuclease4e-1995.1
NC_009337:89631:991649916499832669Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeHNH endonuclease3e-1892
NC_008358:2638245:2681872268187226829031032Hyphomonas neptunium ATCC 15444, complete genomehypothetical protein1e-1790.1
NC_020211:554736:5795815795815806991119Serratia marcescens WW4, complete genomehypothetical protein2e-1789.4
NC_006138:2288261:231215223121522312865714Desulfotalea psychrophila LSv54, complete genome5-methylcytosine-specific restriction enzyme A3e-1789
AC_000091:1191353:121192312119231212756834Escherichia coli W3110 DNA, complete genome5-methylcytosine-specific restriction endonuclease B5e-1787.8
NC_000913:1188999:120956912095691210402834Escherichia coli K12, complete genomee14 prophage; 5-methylcytosine-specific restriction endonuclease B5e-1787.8
NC_014965:2200974:221588722158872216594708Vibrio vulnificus MO6-24/O chromosome I, complete sequenceHNH endonuclease3e-1685.9
NC_012660:5242392:525473652547365255449714Pseudomonas fluorescens SBW25 chromosome, complete genomeputative 5-methylcytosine-specific restriction enzyme3e-1375.9
NC_013521:302574:3175943175943187811188Sanguibacter keddieii DSM 10542, complete genomeHNH endonuclease2e-1169.3
NC_011146:3206000:321961232196123220313702Geobacter bemidjiensis Bem, complete genomeHNH endonuclease4e-0962
NC_007510:943068:953591953591953959369Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein9e-0960.5
NC_014931:724102:7473827473827485361155Variovorax paradoxus EPS chromosome, complete genomeHNH endonuclease1e-0653.9