Pre_GI: BLASTP Hits

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Query: NC_015275:3761889:3764899 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 3764899, End: 3765342, Length: 444

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016641:2225779:224448922444892244911423Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator1e-1168.2
NC_021171:4425050:442972044297204430145426Bacillus sp. 1NLA3E, complete genometranscriptional regulator2e-1065.1
NC_017191:3901914:390748439074843907936453Bacillus amyloliquefaciens XH7 chromosome, complete genomeMarR family transcriptional regulator2e-1064.7
NC_017188:3900951:390579239057923906244453Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional regulator (MarR family) protein2e-1064.7
NC_011837:56000:757257572576159435Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-1064.3
NC_009706:56000:757257572576159435Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator2e-1064.3
NC_020272:20435:365603656037012453Bacillus amyloliquefaciens IT-45, complete genometranscriptional regulator slyA3e-1063.9
NC_019842:3921424:392708339270833927535453Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein3e-1063.9
NC_020410:3868573:387432038743203874772453Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative transcriptional regulator (MarR family)3e-1063.9
NC_009725:3878862:388379838837983884250453Bacillus amyloliquefaciens FZB42, complete genomeYybA3e-1063.9
NC_014622:653599:671371671371671793423Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator4e-1063.5
NC_014408:682689:685230685230685685456Methanothermobacter marburgensis str. Marburg chromosome, completetranscriptional regulator2e-0858.2
NC_014664:2373451:237882323788232379281459Rhodomicrobium vannielii ATCC 17100 chromosome, complete genometranscriptional regulator, MarR family2e-0857.8
NC_006270:568171:580333580333580785453Bacillus licheniformis ATCC 14580, complete genomenegative regulator of yyaTS - YybA9e-0855.8
NC_006322:567987:580124580124580576453Bacillus licheniformis ATCC 14580, complete genomeYybA9e-0855.8
NC_020244:4020315:402517540251754025627453Bacillus subtilis XF-1, complete genomeputative transcriptional regulator1e-0755.5
NC_014976:2175667:217995021799502180402453Bacillus subtilis BSn5 chromosome, complete genomeputative MarR family transcriptional regulator1e-0755.5
NC_000964:4164683:418246941824694182921453Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-0755.5
NC_016077:702000:716789716789717229441Acidaminococcus intestini RyC-MR95 chromosome, complete genomeMarR-family transcriptional regulator1e-0755.5
NC_015589:38418:460064600646497492Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeregulatory protein MarR1e-0755.5
NC_014800:329861:341212341212341724513Pseudoalteromonas sp. SM9913 chromosome chromosome II, completeMarR family transcriptional regulatory protein3e-0753.9
NC_013198:394000:395755395755396189435Lactobacillus rhamnosus GG, complete genometranscriptional regulator, MarR family3e-0753.9
NC_013406:3975512:398916639891663989618453Paenibacillus sp. Y412MC10 chromosome, complete genomeMarR family transcriptional regulator7e-0752.8
NC_016935:3819500:384198238419823842434453Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein1e-0652.4
NC_016641:4727000:473337247333724733824453Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator yybA1e-0652
NC_015172:951550:952788952788953225438Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, MarR family1e-0651.6
NC_014639:1:297562975630208453Bacillus atrophaeus 1942 chromosome, complete genomeMarR family transcriptional regulator2e-0651.2
CP002207:1:297562975630208453Bacillus atrophaeus 1942, complete genomeMarR family transcriptional regulator2e-0651.2
UCMB5137:1:201942019420646453Bacillus atrophaeus UCMB-5137MarR family transcriptional regulator2e-0651.2