Pre_GI: BLASTP Hits

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Query: NC_015224:3820338:3828813 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 3828813, End: 3830021, Length: 1209

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:357928:3751743751743763821209Citrobacter rodentium ICC168, complete genomeAatA, outer membrane protein0639
CU928159:30700:3860738607398451239Escherichia coli str. 55989 plasmid 55989p, complete genomeAatA outermembrane protein1e-42174
NC_009786:43331:6176861768629341167Escherichia coli E24377A plasmid pETEC_80, complete sequencehypothetical protein1e-1894.7