Pre_GI: BLASTP Hits

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Query: NC_014169:1099024:1107734 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 1107734, End: 1108900, Length: 1167

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018720:1336839:1345017134501713462521236Bifidobacterium asteroides PRL2011 chromosome, complete genomeMFS transporter, probably The macrolide (erythromycin, oleando-mycin, azithromycin) efflux, MefA3e-78292
NC_018681:5695343:5723529572352957247521224Nocardia brasiliensis ATCC 700358 chromosome, complete genomemajor facilitator transporter4e-0962.8
NC_013525:556036:5726215726215738831263Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomemajor facilitator superfamily MFS_14e-0962.8
NC_015574:806762:8079678079678092231257Methanobacterium sp. SWAN-1 chromosome, complete genomemajor facilitator superfamily protein3e-0859.7
NC_011059:65414:8983789837911651329Prosthecochloris aestuarii DSM 271, complete genomemajor facilitator superfamily MFS_13e-0756.6
NC_009848:3582384:3599030359903036002921263Bacillus pumilus SAFR-032, complete genomemajor facilitator superfamily macrolide:cation symporter (or antiporter or uniporter)7e-0755.5