Pre_GI: BLASTP Hits

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Query: NC_014034:152264:175476 Rhodobacter capsulatus SB1003 chromosome, complete genome

Start: 175476, End: 176249, Length: 774

Host Lineage: Rhodobacter capsulatus; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain is a derivative strain isolated in the laboratory of Barry Marrs from the classical progenitor strain B10. It is rifampicin-resistant, produces GTA, and is capable of growing under high illumination (resistant to photooxidative killing). Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to use photosynthesis and usually can grow under both anaerobic and aerobic conditions. This organism is a facultatively phototrophic purple non-sulfur bacterium and the type species of the Rhodobacter group. The colony's color depends largely on the amount of oxygen present in its environment. While it is able to produce cellular energy in a number of different ways, it can rely on anoxygenic photosynthesis under anaerobic conditions in the presence of light. Some strains produce the Gene Transfer Element (GTA), a pro-phage particle capable of transferring genetic material between strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010725:4035397:406131340613134062149837Methylobacterium populi BJ001, complete genomebinding-protein-dependent transport systems inner membrane component1e-25116
NC_012560:5276000:530122153012215302009789Azotobacter vinelandii DJ, complete genomeBinding-protein-dependent transport systems inner membrane component8e-22104
NC_021150:5234000:525911352591135259901789Azotobacter vinelandii CA6, complete genomeBinding-protein-dependent transport systems inner membrane component8e-22104
NC_015136:2282488:231052623105262311443918Burkholderia sp. CCGE1001 chromosome 1, complete sequencepeptide ABC transporter permease2e-0963.2
NC_014622:5553628:555627055562705557100831Paenibacillus polymyxa SC2 chromosome, complete genomenickel import ABC transporter permease subunit nikc7e-0961.2
NC_015573:1979202:198850019885001989390891Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter integral membrane protein1e-0860.5
NC_007952:3283394:329380832938083294704897Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC nickel transporter, inner membrane subunit2e-0859.7
NC_014328:2467239:247854924785492479373825Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative peptide ABC transporter permease4e-0755.5
NC_004741:4160500:418646441864644187297834Shigella flexneri 2a str. 2457T, complete genometransport of nickel, membrane protein5e-0755.1
NC_014732:141000:155415155415156287873Halogeometricum borinquense DSM 11551 plasmid pHBOR04, completeABC-type dipeptide/oligopeptide/nickel transport system, permease component8e-0754.3
NC_013192:63111:641546415464966813Leptotrichia buccalis DSM 1135, complete genomebinding-protein-dependent transport systems inner membrane component1e-0653.5
NC_008698:1556223:158271615827161583597882Thermofilum pendens Hrk 5, complete genomebinding-protein-dependent transport systems inner membrane component5e-0651.6
NC_015573:110108:110108110108111037930Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomenickel ABC transporter permease subunit NikC7e-0651.2
NC_018870:354164:364003364003364875873Thermacetogenium phaeum DSM 12270 chromosome, complete genomeglutathione transport system permease protein GsiD9e-0650.8