Pre_GI: BLASTP Hits

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Query: NC_013890:808791:813691 Dehalococcoides sp. GT chromosome, complete genome

Start: 813691, End: 815010, Length: 1320

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009483:2489000:2490625249062524919291305Geobacter uraniireducens Rf4 chromosome, complete genomephenylacetate--CoA ligase2e-149529
NC_016627:1960097:1982156198215619834601305Clostridium clariflavum DSM 19732 chromosome, complete genomecoenzyme F390 synthetase9e-148523
NC_011979:3045952:3065023306502330663271305Geobacter sp. FRC-32, complete genomePhenylacetate--CoA ligase8e-147520
NC_015499:1493500:1500640150064015019441305Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhenylacetate--CoA ligase4e-134478
NC_020409:363114:3655483655483668521305Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completePhenylacetate-coenzyme A ligase7e-134477
NC_011979:3070110:3072583307258330738871305Geobacter sp. FRC-32, complete genomePhenylacetate--CoA ligase7e-132471
NC_015499:1493500:1504803150480315061101308Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhenylacetate--CoA ligase3e-132471
NC_003552:4714457:4734881473488147361851305Methanosarcina acetivorans C2A, complete genomecoenzyme F390 synthetase1e-126453
NC_014253:575360:5820365820365833371302Methanohalobium evestigatum Z-7303 chromosome, complete genomePhenylacetate--CoA ligase7e-125447
NC_013849:1034472:1056461105646110577561296Ferroglobus placidus DSM 10642 chromosome, complete genomeAMP-dependent synthetase and ligase3e-123442
NC_017272:921193:9211939211939225271335Thermus thermophilus SG0.5JP17-16 chromosome, complete genomephenylacetate--CoA ligase3e-120432
NC_018876:2604055:2617254261725426185581305Methanolobus psychrophilus R15 chromosome, complete genomephenylacetate-CoA ligase3e-119429
NC_009712:669647:6737836737836750541272Candidatus Methanoregula boonei 6A8, complete genomephenylacetate--CoA ligase8e-118424
NC_011894:3475775:3482117348211734834481332Methylobacterium nodulans ORS 2060, complete genomephenylacetate-CoA ligase3e-112405
NC_018691:896464:9006069006069019011296Alcanivorax dieselolei B5 chromosome, complete genomePhenylacetate-CoA ligase1e-110400
NC_002570:207555:2130302130302143671338Bacillus halodurans C-125, complete genomephenylacetyl-CoA ligase in the phenylacetic acid catabolic pathway4e-109395
NC_009712:669647:6724826724826737831302Candidatus Methanoregula boonei 6A8, complete genomephenylacetate--CoA ligase4e-108391
NC_015638:1824794:1844428184442818457141287Lacinutrix sp. 5H-3-7-4 chromosome, complete genomePhenylacetate--CoA ligase1e-106387
NC_015500:2329957:2352706235270623540281323Treponema brennaborense DSM 12168 chromosome, complete genomePhenylacetate--CoA ligase1e-106387
NC_014228:4408500:4419780441978044211231344Xenorhabdus nematophila ATCC 19061, complete genomephenylacetyl-CoA ligase, phenylacetic acid degradation6e-106384
NC_015733:2963548:2985941298594129872601320Pseudomonas putida S16 chromosome, complete genomephenylacetate-CoA ligase3e-104379
NC_013892:114884:1197261197261210331308Xenorhabdus bovienii SS-2004 chromosome, complete genomephenylacetyl-CoA ligase, phenylacetic acid degradation3e-104379
NC_014722:1084616:1084616108461610859231308Burkholderia rhizoxinica HKI 454, complete genomeCoenzyme F390 Synthetase / phenylacetate-coenzyme A ligase2e-104379
NC_020302:3014483:3038969303896930402821314Corynebacterium halotolerans YIM 70093 = DSM 44683, completephenylacetate-CoA ligase1e-99363
NC_016027:2512297:2534465253446525357931329Gluconacetobacter xylinus NBRC 3288, complete genomephenylacetate-CoA ligase7e-95347
NC_015578:2026741:2074357207435720757031347Treponema primitia ZAS-2 chromosome, complete genomephenylacetate-coenzyme A ligase9e-94344
NC_015499:1640500:1654187165418716554491263Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhenylacetate--CoA ligase2e-93342
NC_013741:302415:3191133191133203631251Archaeoglobus profundus DSM 5631, complete genomePhenylacetate--CoA ligase4e-90332
NC_009142:1242850:1244426124442612457481323Saccharopolyspora erythraea NRRL 2338, complete genomephenylacetate-coenzyme A ligase1e-88327
NC_013170:311045:3116743116743129121239Cryptobacterium curtum DSM 15641, complete genomephenylacetate-CoA ligase4e-88325
NC_013204:74855:7619876198774391242Eggerthella lenta DSM 2243, complete genomePhenylacetate--CoA ligase1e-84313
NC_017276:2391645:2410071241007124113781308Sulfolobus islandicus REY15A chromosome, complete genomephenylacetate--CoA ligase2e-83310
NC_017275:2519637:2538063253806325393701308Sulfolobus islandicus HVE10/4 chromosome, complete genomephenylacetate-CoA ligase1e-82307
NC_012589:2605085:2621829262182926231361308Sulfolobus islandicus L.S.2.15, complete genomePhenylacetate--CoA ligase1e-82307
NC_012622:2571812:2590640259064025919471308Sulfolobus islandicus Y.G.57.14 chromosome, complete genomephenylacetate--CoA ligase1e-82307
NC_012726:2461102:2479528247952824808351308Sulfolobus islandicus M.16.4 chromosome, complete genomephenylacetate--CoA ligase1e-82307
NC_012588:2483000:2499134249913425004411308Sulfolobus islandicus M.14.25 chromosome, complete genomephenylacetate--CoA ligase1e-82307
NC_012632:2564801:2583227258322725845341308Sulfolobus islandicus M.16.27 chromosome, complete genomephenylacetate--CoA ligase1e-82307
NC_012623:2680601:2697343269734326986501308Sulfolobus islandicus Y.N.15.51 chromosome, complete genomephenylacetate--CoA ligase2e-82306
NC_019673:1039258:1059925105992510613011377Saccharothrix espanaensis DSM 44229 complete genomePhenylacetate-CoA ligase2e-81303
NC_009943:970901:9719049719049731991296Candidatus Desulfococcus oleovorans Hxd3, complete genomePhenylacetate--CoA ligase6e-81301
NC_016629:415711:4356054356054368971293Desulfovibrio africanus str. Walvis Bay chromosome, completephenylacetate--CoA ligase2e-80300
NC_013093:1036772:1062951106295110642551305Actinosynnema mirum DSM 43827, complete genomePhenylacetate--CoA ligase7e-74278
NC_016885:1153277:1162327116232711636311305Pyrobaculum oguniense TE7 chromosome, complete genomeCoenzyme F390 synthetase1e-71270
NC_002754:2391867:2392154239215423931731020Sulfolobus solfataricus P2, complete genomeCoA-ligase / coenzyme F390 synthetase, putative5e-68258
NC_016627:3158353:3166226316622631675451320Clostridium clariflavum DSM 19732 chromosome, complete genomecoenzyme F390 synthetase1e-64247
NC_015275:4577642:4586034458603445873501317Clostridium lentocellum DSM 5427 chromosome, complete genomePhenylacetate--CoA ligase3e-58226
NC_015656:3200500:3211392321139232127711380Frankia symbiont of Datisca glomerata chromosome, complete genomePhenylacetate--CoA ligase1e-57224
NC_008148:1859888:1867573186757318688951323Rubrobacter xylanophilus DSM 9941, complete genomePhenylacetate--CoA ligase2e-50200
NC_008148:1859888:1876471187647118778201350Rubrobacter xylanophilus DSM 9941, complete genomePhenylacetate--CoA ligase2e-50200
NC_008699:2260606:2277546227754622789641419Nocardioides sp. JS614, complete genomePhenylacetate--CoA ligase2e-48193
NC_021184:3912805:3924377392437739257111335Desulfotomaculum gibsoniae DSM 7213, complete genomecoenzyme F390 synthetase1e-46187
NC_007953:938346:9538109538109552221413Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative coenzyme F390 synthetase II7e-41168
NC_014623:7482229:7496365749636574976961332Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephenylacetate-CoA ligase6e-41168
NC_015422:1694363:1718192171819217195531362Alicycliphilus denitrificans K601 chromosome, complete genomePhenylacetate--CoA ligase1e-39164
NC_006513:1379735:1412255141225514136491395Azoarcus sp. EbN1, complete genomepossible benzoylacetate-CoA ligase2e-38160
NC_014844:3469848:3475669347566934769341266Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeAMP-dependent synthetase and ligase3e-35150
NC_016803:2431672:2436907243690724381721266Desulfovibrio desulfuricans ND132 chromosome, complete genomeAMP-dependent synthetase and ligase6e-35148
NC_014623:7482229:7498478749847874997371260Stigmatella aurantiaca DW4/3-1 chromosome, complete genomecoenzyme f390 synthetase8e-35148
NC_016610:795903:8005968005968019151320Tannerella forsythia ATCC 43037 chromosome, complete genomehypothetical protein5e-33142
NC_014931:6203872:6208513620851362097571245Variovorax paradoxus EPS chromosome, complete genomeAMP-dependent synthetase and ligase3e-30133
NC_009092:3057319:3070906307090630721321227Shewanella loihica PV-4, complete genomeputative phenylacetate-coenzyme A ligase1e-29130
NC_008786:3045770:3063888306388830651291242Verminephrobacter eiseniae EF01-2, complete genomeputative phenylacetate-CoA ligase2e-28127
NC_014328:2643588:2651432265143226527451314Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative AMP-binding protein3e-28126
NC_007517:1998342:2014298201429820156501353Geobacter metallireducens GS-15, complete genomeCoenzyme F390 synthetase-like1e-26121
NC_019977:1456366:1469437146943714707231287Methanomethylovorans hollandica DSM 15978, complete genomecoenzyme F390 synthetase3e-26119
NC_014551:2510000:2525555252555525268771323Bacillus amyloliquefaciens DSM 7, complete genomeCoenzyme F390 synthetase8e-26118
NC_013216:3625830:3632210363221036336131404Desulfotomaculum acetoxidans DSM 771, complete genomecoenzyme F390 synthetase-like protein2e-24114
NC_008554:1623041:1624450162445016257781329Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein3e-24113
NC_009051:657000:6658626658626671421281Methanoculleus marisnigri JR1, complete genomeCapK related-protein1e-22107
NC_006138:273237:2836552836552849561302Desulfotalea psychrophila LSv54, complete genomesimilar to coenzyme F390 synthetase1e-21104
NC_020409:1956485:1963804196380419651141311Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeRelated to coenzyme F390 synthetase1e-20101
NC_007181:1963887:1976028197602819774551428Sulfolobus acidocaldarius DSM 639, complete genomephenylacetyl-CoA ligase4e-2099.8
NC_003552:1259356:1272835127283512741721338Methanosarcina acetivorans C2A, complete genomecapsular polysaccharide biosynthesis protein7e-1995.5
NC_012654:18893:3274132741340061266Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequencephenylacetate--CoA ligase9e-1891.7
NC_011297:415760:4297774297774311471371Dictyoglomus thermophilum H-6-12, complete genomecapsular polysaccharide biosynthesis protein5e-1789.4
NC_014254:18193:3767837678390391362Methanohalobium evestigatum Z-7303 plasmid pMETEV01, completecapsular polysaccharide biosynthesis protein7e-1789
NC_015733:2658337:2699616269961627009591344Pseudomonas putida S16 chromosome, complete genomephenylacetate-CoA ligase1e-1584.3
NC_002939:2124642:2137420213742021387601341Geobacter sulfurreducens PCA, complete genomecapK related-protein2e-1480.5
NC_012108:2220983:2249625224962522510011377Desulfobacterium autotrophicum HRM2, complete genomeputative coenzyme F390 synthetase FtsA3e-1480.1
NC_009454:358044:3683923683923697981407Pelotomaculum thermopropionicum SI, complete genomecoenzyme F390 synthetase9e-1478.6
NC_007517:2241104:2245505224550522469681464Geobacter metallireducens GS-15, complete genomeCapK related-protein9e-1478.6
NC_007298:2568851:2601271260127126026261356Dechloromonas aromatica RCB, complete genomepossible CapK protein1e-1378.2
NC_002939:2124642:2144092214409221454531362Geobacter sulfurreducens PCA, complete genomecapK related-protein2e-1274.3
NC_015656:4850833:4865121486512148665211401Frankia symbiont of Datisca glomerata chromosome, complete genomeAMP-dependent synthetase and ligase8e-1272
NC_016112:3103716:312534731253473125985639Methylomicrobium alcaliphilum chromosome, complete genomeCapK protein (fragment)2e-1170.9
NC_011987:362997:3802863802863815841299Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequencecoenzyme F390 synthetase8e-1168.9
NC_002488:1812696:1821986182198618234221437Xylella fastidiosa 9a5c, complete genomecoenzyme F390 synthetase6e-1065.9
NC_017955:1611037:1630447163044716318831437Modestobacter marinus, complete genomecoenzyme F390 synthetase8e-1065.5
NC_014392:1935130:1943128194312819445431416Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomecoenzyme F390 synthetase-like protein2e-0964.3
NC_017270:885179:8916938916938928471155Vibrio cholerae LMA3984-4 chromosome chromosome I, completeCapK protein, putative8e-0962
NC_010162:2406976:2429970242997024314781509Sorangium cellulosum 'So ce 56', complete genomehypothetical protein1e-0861.2
NC_007759:415456:4336014336014350731473Syntrophus aciditrophicus SB, complete genomecoenzyme F390 Synthetase / phenylacetate-coenzyme A ligase1e-0861.2
NC_009457:471337:4773354773354786751341Vibrio cholerae O395 chromosome 2, complete sequencecapK protein2e-0860.8
NC_002505:980595:9865979865979879371341Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completecapK protein, putative2e-0860.5
NC_012578:936000:9440129440129453521341Vibrio cholerae M66-2 chromosome I, complete sequenceputative capK protein2e-0860.5
NC_012582:997268:1008754100875410100941341Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative capK protein2e-0860.5
NC_016445:452100:4635904635904649301341Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completephenylacetate-CoA ligase2e-0860.5
NC_016944:975725:9836189836189849581341Vibrio cholerae IEC224 chromosome I, complete sequencephenylacetate-CoA ligase2e-0860.5
NC_009921:5787437:57874375787437580222914793Frankia sp. EAN1pec, complete genomeBeta-ketoacyl synthase2e-0757
NC_014831:2133060:2161203216120321629511749Thermaerobacter marianensis DSM 12885 chromosome, complete genomeAMP-dependent synthetase and ligase3e-0757
NC_015571:411156:4223024223024236361335Porphyromonas gingivalis TDC60, complete genomeputative coenzyme F390 synthetase4e-0756.6
NC_020133:77341:921469214693069924Mycobacterium liflandii 128FXT, complete genomeCoenzyme F390 synthetase6e-0755.8
NC_014935:1704816:1716499171649917178031305Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeamp-dependent synthetase and ligase1e-0655.1
NC_010612:103081:1306391306391320271389Mycobacterium marinum M, complete genomehypothetical protein2e-0654.3