Pre_GI: BLASTP Hits

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Query: NC_013890:103807:116754 Dehalococcoides sp. GT chromosome, complete genome

Start: 116754, End: 117062, Length: 309

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009455:273519:280911280911281219309Dehalococcoides sp. BAV1 chromosome, complete genomehypothetical protein1e-52204
NC_002936:67896:933419334193646306Dehalococcoides ethenogenes 195, complete genomehypothetical protein1e-48191
NC_002939:3108907:311124931112493111590342Geobacter sulfurreducens PCA, complete genomehypothetical protein6e-32135
NC_009051:1118486:113259911325991132913315Methanoculleus marisnigri JR1, complete genomehypothetical protein5e-27119
NC_014652:2323598:232439323243932324761369Caldicellulosiruptor hydrothermalis 108 chromosome, completehypothetical protein5e-1373.2
NC_013204:3491441:350242835024283502799372Eggerthella lenta DSM 2243, complete genomehypothetical protein7e-1372.4
NC_014720:2420455:242429624242962424664369Caldicellulosiruptor kronotskyensis 2002 chromosome, completehypothetical protein8e-1372.4
NC_019908:1565500:158763315876331587983351Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein4e-1270.1
NC_018607:2472250:249591924959192496269351Brachyspira pilosicoli B2904 chromosome, complete genomehypothetical protein4e-1270.1
NC_015738:2956398:297955929795592980032474Eggerthella sp. YY7918, complete genomehypothetical protein2e-1167.4
NC_014471:1153438:1157708115770811587811074Ignisphaera aggregans DSM 17230 chromosome, complete genomeLinocin_M18 bacteriocin protein5e-1166.6
NC_015680:841783:858142858142858402261Pyrococcus yayanosii CH1 chromosome, complete genomehypothetical protein5e-0959.7
NC_019942:112182:116986116986117273288Aciduliprofundum sp. MAR08-339, complete genomeRubrerythrin7e-0959.3
NC_017030:4062699:408611340861134086502390Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein2e-0651.2
NC_016627:793583:816392816392816706315Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein3e-0650.8
NC_014623:5885903:588590358859035886262360Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein5e-0649.7