Pre_GI: BLASTP Hits

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Query: NC_013768:1802313:1815258 Listeria monocytogenes 08-5923, complete genome

Start: 1815258, End: 1815671, Length: 414

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor".




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013766:1835964:184852718485271848940414Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-70263
NC_011837:3814000:382769238276923828105414Clostridium kluyveri NBRC 12016, complete genomehypothetical protein7e-36149
NC_009706:3882500:389618938961893896602414Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein7e-36149
NC_014376:3399366:340341634034163403829414Clostridium saccharolyticum WM1 chromosome, complete genomeputative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily2e-35147
NC_014376:3399366:341203634120363412449414Clostridium saccharolyticum WM1 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-35147
NC_016048:4163225:419172141917214192326606Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-32138
NC_010337:98974:119439119439119855417Heliobacterium modesticaldum Ice1, complete genomehypothetical protein1e-21101
NC_016791:3891272:391078939107893911199411Clostridium sp. BNL1100 chromosome, complete genomeDNA-directed RNA polymerase subunit sigma242e-1994
NC_016627:4323370:436697143669714367363393Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-1580.5
NC_018870:757416:803292803292803696405Thermacetogenium phaeum DSM 12270 chromosome, complete genomeputative RNA polymerase sigma factor, region 3/41e-1478.6
NC_011830:2623346:263331626333162633735420Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-1476.6
NC_010337:2848360:285327028532702853668399Heliobacterium modesticaldum Ice1, complete genomehypothetical protein1e-1271.6
NC_016048:3983500:399978739997874000206420Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-0961.2
NC_007907:3872805:389938338993833899901519Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-0959.7
NC_016791:3953972:396734739673473967796450Clostridium sp. BNL1100 chromosome, complete genomeDNA-directed RNA polymerase subunit sigma247e-0959.3
NC_021184:3533500:353382435338243534273450Desulfotomaculum gibsoniae DSM 7213, complete genomehypothetical protein1e-0858.5
NC_007907:5185510:521927252192725219826555Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0651.6
NC_014376:2964731:298719129871912987646456Clostridium saccharolyticum WM1 chromosome, complete genomeputative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily2e-0651.2
NC_014246:1402500:142343114234311423943513Mobiluncus curtisii ATCC 43063 chromosome, complete genomeRNA polymerase sigma-B factor3e-0650.4
NC_014393:4775452:478175047817504782355606Clostridium cellulovorans 743B chromosome, complete genomesigma-70 region 4 domain-containing protein4e-0650.4
NC_008023:1070986:110004411000441100619576Streptococcus pyogenes MGAS2096, complete genomeRNA polymerase sigma-B factor9e-0648.9