Pre_GI: BLASTP Hits

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Query: NC_013716:5141269:5150321 Citrobacter rodentium ICC168, complete genome

Start: 5150321, End: 5151082, Length: 762

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:3112023:3123442312344231252771836Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein3e-108391
NC_013364:2898964:291442029144202915247828Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-65249
NC_013364:2898964:291339529133952914381987Escherichia coli O111:H- str. 11128, complete genomehypothetical protein6e-32137