Pre_GI: BLASTP Hits

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Query: NC_013716:5020204:5039483 Citrobacter rodentium ICC168, complete genome

Start: 5039483, End: 5039851, Length: 369

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020260:3457597:345879934587993459167369Cronobacter sakazakii Sp291, complete genomeprotein YqjC4e-22103
NC_009778:3454790:345597734559773456360384Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-22103
NC_020209:4312892:431448343144834314878396Pseudomonas poae RE*1-1-14, complete genomehypothetical protein1e-0755.5