Pre_GI: BLASTP Hits

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Query: NC_013716:5020204:5039143 Citrobacter rodentium ICC168, complete genome

Start: 5039143, End: 5039448, Length: 306

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020260:3457597:345920334592033459505303Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-22103
NC_009778:3454790:345639634563963456698303Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-22103
NC_017047:4379989:437998943799894380291303Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-1685.5
NC_015061:4286000:428610342861034286405303Rahnella sp. Y9602 chromosome, complete genomehypothetical protein1e-1685.5
NC_012759:2261416:226454922645492264854306Escherichia coli BW2952 chromosome, complete genomehypothetical protein4e-0650.4
AC_000091:2379670:238539223853922385697306Escherichia coli W3110 DNA, complete genomehypothetical protein4e-0650.4
NC_010473:2465844:246973224697322470037306Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein4e-0650.4
NC_000913:2373984:237874423787442379049306Escherichia coli K12, complete genomehypothetical protein4e-0650.4