Pre_GI: BLASTP Hits

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Query: NC_013716:5020204:5038736 Citrobacter rodentium ICC168, complete genome

Start: 5038736, End: 5039140, Length: 405

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009778:3454790:345670134567013457099399Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-33139
NC_020260:3457597:345950834595083459906399Cronobacter sakazakii Sp291, complete genomeinner membrane protein YqjE4e-33139
NC_017047:4379989:438029443802944380701408Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein2e-1477.8
NC_015061:4286000:428640842864084286815408Rahnella sp. Y9602 chromosome, complete genomehypothetical protein2e-1477.8