Pre_GI: BLASTP Hits

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Query: NC_013716:5020204:5038462 Citrobacter rodentium ICC168, complete genome

Start: 5038462, End: 5038746, Length: 285

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020260:3457597:345990334599033460199297Cronobacter sakazakii Sp291, complete genomehypothetical protein7e-34142
NC_009778:3454790:345709634570963457392297Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-34142
NC_015061:4286000:428681242868124287096285Rahnella sp. Y9602 chromosome, complete genomehypothetical protein3e-1890.1
NC_017047:4379989:438069843806984380982285Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein5e-1889.7