Pre_GI: BLASTP Hits

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Query: NC_013716:4885776:4903164 Citrobacter rodentium ICC168, complete genome

Start: 4903164, End: 4903595, Length: 432

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:528296:537339537339537749411Enterobacteriaceae bacterium strain FGI 57, complete genomeToxin co-regulated pilus biosynthesis protein Q2e-34144
NC_015061:4286000:429376842937684294208441Rahnella sp. Y9602 chromosome, complete genometype IV pilus biogenesis protein5e-24109
NC_015761:299386:332562332562333035474Salmonella bongori NCTC 12419, complete genomeexported pilin-like protein3e-2097.1
NC_017047:4379989:438784343878434388094252Rahnella aquatilis HX2 chromosome, complete genometype IV pilus biogenesis protein2e-1994
NC_014618:1040381:105420810542081054636429Enterobacter cloacae SCF1 chromosome, complete genometype IV pilus biogenesis protein2e-1787.8