Pre_GI: BLASTP Hits

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Query: NC_013716:4885776:4901250 Citrobacter rodentium ICC168, complete genome

Start: 4901250, End: 4903133, Length: 1884

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:528296:5353775353775372961920Enterobacteriaceae bacterium strain FGI 57, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein3e-141502
NC_014618:1040381:1052620105262010541911572Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein3e-20100
NC_015061:4286000:4292042429204242937091668Rahnella sp. Y9602 chromosome, complete genomehypothetical protein2e-1584.7
NC_017047:4379989:4385964438596443875951632Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein4e-1377
NC_015761:299386:3308933308933324911599Salmonella bongori NCTC 12419, complete genometype IV pilin1e-0655.1