Pre_GI: BLASTP Hits

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Query: NC_013716:4306695:4346910 Citrobacter rodentium ICC168, complete genome

Start: 4346910, End: 4347224, Length: 315

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009778:259241:260583260583260897315Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-45181
NC_013282:3719500:373649737364973736811315Cronobacter turicensis, complete genomeCellobiose-specific phosphotransferase enzyme IIB component2e-45181
NC_020260:263528:264870264870265184315Cronobacter sakazakii Sp291, complete genomecellobiose-specific phosphotransferase enzyme IIB component2e-45181
NC_008800:4488112:449114944911494491463315Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,pts system, cellobiose-specific IIB component2e-29127
NC_020181:1344259:134559613455961345907312Enterobacter aerogenes EA1509E, complete genomePTS system, cellobiose-specific IIB component5e-29126
NC_014219:192555:196401196401196712312Bacillus selenitireducens MLS10 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit3e-2097.1
NC_012731:2739964:274637427463742746697324Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomelactose/cellobiose-specific PTS family enzyme IIB component4e-2096.7
NC_016845:2781438:278784727878472788170324Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,lactose/cellobiose-specific PTS family enzyme IIB component4e-2096.7
NC_013891:2643085:265318026531802653485306Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomePTS system, beta-glucoside-specific, IIB component3e-1993.6
NC_003210:2749538:275760627576062757911306Listeria monocytogenes EGD-e, complete genomehypothetical protein8e-1992.4
NC_012488:2719955:272887527288752729180306Listeria monocytogenes Clip81459, complete genomecellobiose phosphotransferase enzyme IIB component2e-1891.3
NC_011660:2839201:285040128504012850706306Listeria monocytogenes HCC23 chromosome, complete genomePTS system lichenan-specific transporter subunit IIB2e-1891.3
NC_002973:2701983:271090327109032711208306Listeria monocytogenes str. 4b F2365, complete genomePTS system, beta-glucoside-specific, IIB component2e-1891.3
NC_003212:2837366:284754828475482847853306Listeria innocua Clip11262, complete genomehypothetical protein2e-1890.9
NC_013766:171889:183986183986184291306Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-1890.9
NC_013768:171889:183986183986184291306Listeria monocytogenes 08-5923, complete genomehypothetical protein2e-1890.9
NC_010582:1771591:177329017732901773607318Streptococcus pneumoniae CGSP14, complete genomePTS system, IIB component5e-1786.3
NC_012912:1200000:121510112151011215406306Dickeya zeae Ech1591, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit9e-1682
NC_008563:1651270:166317316631731663484312Escherichia coli APEC O1, complete genomePTS system, cellobiose-specific IIB component5e-1579.7
NC_010498:1615980:162358916235891623900312Escherichia coli SMS-3-5, complete genomePTS system lactose/cellobiose family IIB subunit5e-1579.7
NC_016605:132253:137529137529137843315Pediococcus claussenii ATCC BAA-344 chromosome, complete genomePTS system, Lactose/Cellobiose specific IIB subunit5e-1579.7
CP002185:1727493:173792117379211738232312Escherichia coli W, complete genomePTS system, cellobiose family IIB component5e-1579.7
CP002516:2361628:236762323676232367934312Escherichia coli KO11, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit5e-1579.7
CU928160:1625535:163596316359631636274312Escherichia coli IAI1 chromosome, complete genomeputative cellobiose-specific phosphotransferase enzyme IIB component5e-1579.7
NC_011415:1715644:172607217260721726383312Escherichia coli SE11 chromosome, complete genomePTS system cellobiose-specific IIB component5e-1579.7
NC_011741:1625535:163596316359631636274312Escherichia coli IAI1 chromosome, complete genomeputative cellobiose-specific phosphotransferase enzyme IIB component5e-1579.7
NC_016902:2361628:236762323676232367934312Escherichia coli KO11FL chromosome, complete genomePTS system lactose/cellobiose-specific transporter subunit IIB5e-1579.7
NC_008262:2824503:283714728371472837449303Clostridium perfringens SM101, complete genomePTS system, IIB component4e-1579.7
NC_009800:1632585:164205316420531642364312Escherichia coli HS, complete genomePTS system, lactose/cellobiose family IIB component6e-1579.3
NC_020291:5409587:542631754263175426616300Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphotransferase system cellobiose-specific component IIB9e-1579
NC_008261:2743942:276488027648802765209330Clostridium perfringens ATCC 13124, complete genomePTS system, lactose/cellobiose-specific IIB component9e-1579
NC_020995:3252500:325769332576933258004312Enterococcus casseliflavus EC20, complete genomehypothetical protein1e-1375.1
NC_012912:844339:850144850144850461318Dickeya zeae Ech1591, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit5e-1372.8
NC_016641:373623:386847386847387170324Paenibacillus terrae HPL-003 chromosome, complete genomePTS system lichenan-specific transporter subunit IIB8e-1268.9
NC_006155:3456488:346346834634683463785318Yersinia pseudotuberculosis IP 32953, complete genomePTS system, cellobiose-specific IIB component2e-1167.4
NC_010634:3368000:337712533771253377442318Yersinia pseudotuberculosis PB1/+, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit2e-1167.4
NC_010465:1273000:128289212828921283209318Yersinia pseudotuberculosis YPIII, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit2e-1167.4
NC_009708:1284555:129451312945131294830318Yersinia pseudotuberculosis IP 31758 chromosome, complete genomePTS system N,N'-diacetylchitobiose-specific transporter subunit IIB2e-1167.4
NC_004088:1387276:139897013989701399317348Yersinia pestis KIM, complete genomePEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin6e-1166.2
NC_005810:2739878:275163327516332751980348Yersinia pestis biovar Microtus str. 91001, complete genomeN,N'-diacetylchitobiose-specific PTS system transporter subunit IIB6e-1166.2
NC_008150:2681327:269311726931172693434318Yersinia pestis Antiqua, complete genomePTS system, cellobiose-specific IIB component6e-1166.2
NC_003143:2992295:300408530040853004402318Yersinia pestis CO92, complete genomePTS system, cellobiose-specific IIB component6e-1166.2
NC_008149:1317109:132889913288991329216318Yersinia pestis Nepal516, complete genomePTS system, cellobiose-specific IIB component6e-1166.2
NC_009381:1783886:179203717920371792354318Yersinia pestis Pestoides F chromosome, complete genomePTS system N,N'-diacetylchitobiose-specific transporter subunit IIB6e-1166.2
NC_014029:3047506:305929630592963059613318Yersinia pestis Z176003 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIB6e-1166.2
NC_017154:2999841:300682030068203007137318Yersinia pestis D106004 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIB6e-1166.2
NC_017160:2976683:298427129842712984588318Yersinia pestis D182038 chromosome, complete genomePTS system cellobiose-specific transporter subunit IIB6e-1166.2
NC_017168:2751027:275800627580062758323318Yersinia pestis A1122 chromosome, complete genomePTS system N,N'-diacetylchitobiose-specific transporter subunit IIB6e-1166.2
NC_017265:3063016:306999530699953070312318Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,PTS system cellobiose-specific transporter subunit IIB6e-1166.2
NC_014377:1985714:199726619972661997592327Thermosediminibacter oceani DSM 16646 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit6e-1166.2
NC_015389:114469:122668122668122979312Coriobacterium glomerans PW2 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit9e-1165.5
NC_014377:321949:337203337203337511309Thermosediminibacter oceani DSM 16646 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit1e-1065.1
NC_010159:3779129:378888537888853789202318Yersinia pestis Angola, complete genomePTS system, cellobiose-specific IIB component2e-1064.7
NC_013203:1406158:140751414075141407828315Atopobium parvulum DSM 20469, complete genomephosphotransferase system lactose/cellobiose- specific IIB subunit4e-1063.2
NC_008800:1090000:109008010900801090397318Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB1e-0961.6
NC_015224:3587500:361237436123743612691318Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB1e-0961.6
NC_010674:2185704:219253021925302192838309Clostridium botulinum B str. Eklund 17B, complete genomePTS system, diacetylchitobiose-specific IIB component1e-0858.2
NC_019978:2532640:255213725521372552451315Halobacteroides halobius DSM 5150, complete genomephosphotransferase system cellobiose-specific component IIB1e-0755.5
NC_006177:1060428:106793110679311068233303Symbiobacterium thermophilum IAM 14863, complete genomePTS system cellobiose-specific IIB component5e-0753.1