Pre_GI: BLASTP Hits

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Query: NC_013716:3708415:3712707 Citrobacter rodentium ICC168, complete genome

Start: 3712707, End: 3713006, Length: 300

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:398012:405591405591406001411Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein6e-2199.4
NC_020063:4170464:417810241781024178617516Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein7e-1062.8